Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1994 ATGATTGCACCCCACTTATGGATACCAACAGTACTGTTTTTGCTGGCGTTTCCCTTGCTTTTGGCAGCTGAAGAGGAGGATTCCACCAGAAATAGCATCATCTTCACCACACTTGGCAGAGCTTTCTACGCTTTTGATATCTATTCCCTCCCAATTCCACTTCACCACCAATCACCCAACAATACTAACCAAGAATTACAACTCACTGACGGCTACTCCGTCAATTTTAACGGCCACTTTCTTCCCAATCACTCATCCATTAAACTCCCATCAGACCAAGACCAACCTCCTCTTCAACTCGTTTACGTCACTGAGAGAAACGGGTTTCCCACCATATACTACGACGCCGTTTTCACAACTACCAAAAAAACAAGCACAAGAAGATCAGCTCTTGAATCTGATATCGTGGAAAGAATTCAACTTCCTTTGTTGCAAAATCACGTCACAGAAACAACTCAGAATCAAGTTTCAATCAAAGATAAACCCAGTGTGACTAGCGATGGTGAATATTTAGTTTACGTTTCAACACACGAGAATCCCGGTGTGCCACGTGTCAGCTGGACAGCCGTTTATTCTACGCATCTCAAATCAGGTCTCACCCGAAGACTCACTCCCTACGGTGTCGCTGATTTCAGCCCCGCCGTTTCTCCCTCCGGTAAATGGACTGCAGTCGCTTCTTATGGCGCCCAAGGTTGGTCCGGCGAAGTAGAGGATCTTACTACAGATATCTACGTTTTCCTCACTCTAGACGGAACTCAGCGATACAAGGTTCTTGAACACGGTGGCTGGCCGTGTTGGGTTGACGATCGTACTATTTACTTTCACCGGAGAGGTATTGACAACTGGTGGAGTATTTACAGAGCAATACTCACCGCCGATTCTTCAGACTCTGTGATTATTGAGCGAGTCACCCCACCGGGTCTACACGCGTTCACACCAGCAACGTCTCCAGGAAACCATAAGTTCATAGCCGTCGCTACAAGAAGACCTGGCTCTAGTTTCCGTCATATTGAGTTGTTCGACCTGGTTAACAACGAGTTCAAGGAGCTAACTCGTTTCGTCTCGCCTCAAACTCACCATCTAAACCCGTTTATCTCACCCGATGCAACACGTGTCGGGTACCACAAGTGTAGGGGAAAAGTAAGCAATACCAGTCCTCAGTTTTTACTAGAGAATGTTCGGAGCCCCGTACCAAATCTAACTCTTTTCCGGTTCATCGGTTCGTTTCCGGTTTTCTCTCCCCGTGGAGACCGAATCCTTTACGTTGACTTGCCTGGCGTTTATGTCGTGAACCGGGACGGTTCAAACCCGCGTAAGGTTTCTAACGCCATGGCTTTCTCAACAGCCTGGGACCGGGTTCGACCCGGTGTAATCTACACAGCAATTGGACAAACATTTGCTTCGGAGAGCACGGAGGTTGATATCATCTCCATCGACGTCGACCGGAATATCGTCAAGAAGTTAACCTTAGACGGAAAGAACAACGCCTTTCCGTCTCCTTCCCCTGACGGAAAATGGATCGTGTTCCGTTCGGGTCGTTCGGGTCATAAGAATCTCTACGTGATGAATGCTGTTGAGGGAGAGAAAGAAGGGCTTAGAAGACTAACGGAGGGTCCATGGACAGATACAATGTGCAACTGGTCACCTACCGGAGAATGGATCGCTTTTGCGTCGGATCGTCATGACCCTGGGAGCGGAAGCTTCGAGGTTTATCTGATCCACCCAGATGGAACCGGGTTGAAGAAACTGATTCAAAGCGGGTCGGGTGGGAGGACGAACCACCCGTATTTTAGCCCTGATGGGAAGAGTCTTGTATTTACGTCAGACTATGCGGGTATATCAGCTGAGCCAATTTCAAATCCGCATCATTATCAGCCATATGGAGAAATATTCACAGTTAGATTGGATGGTTCGGGGTTGACGAGATTGACACATAATTCGTATGAAGATGGAACCCCTGCTTGGTCACCCAAGTATATGAAGCCAGTGAATGTTGAGAGGCCCAAGGGTGGAGCTTATTGCTCTTTTGCTGACTGTCACTGGCTCAACAACATGCCAAATTATGCAGGTCTAAAGGCACAGTGTGCTATATAA 2094 0.4766 MIAPHLWIPTVLFLLAFPLLLAAEEEDSTRNSIIFTTLGRAFYAFDIYSLPIPLHHQSPNNTNQELQLTDGYSVNFNGHFLPNHSSIKLPSDQDQPPLQLVYVTERNGFPTIYYDAVFTTTKKTSTRRSALESDIVERIQLPLLQNHVTETTQNQVSIKDKPSVTSDGEYLVYVSTHENPGVPRVSWTAVYSTHLKSGLTRRLTPYGVADFSPAVSPSGKWTAVASYGAQGWSGEVEDLTTDIYVFLTLDGTQRYKVLEHGGWPCWVDDRTIYFHRRGIDNWWSIYRAILTADSSDSVIIERVTPPGLHAFTPATSPGNHKFIAVATRRPGSSFRHIELFDLVNNEFKELTRFVSPQTHHLNPFISPDATRVGYHKCRGKVSNTSPQFLLENVRSPVPNLTLFRFIGSFPVFSPRGDRILYVDLPGVYVVNRDGSNPRKVSNAMAFSTAWDRVRPGVIYTAIGQTFASESTEVDIISIDVDRNIVKKLTLDGKNNAFPSPSPDGKWIVFRSGRSGHKNLYVMNAVEGEKEGLRRLTEGPWTDTMCNWSPTGEWIAFASDRHDPGSGSFEVYLIHPDGTGLKKLIQSGSGGRTNHPYFSPDGKSLVFTSDYAGISAEPISNPHHYQPYGEIFTVRLDGSGLTRLTHNSYEDGTPAWSPKYMKPVNVERPKGGAYCSFADCHWLNNMPNYAGLKAQCAI* 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1994 697 Gene3D - 144 388 IPR011042 -
Psa5g1994 697 SUPERFAMILY Tricorn protease N-terminal domain 408 657 - -
Psa5g1994 697 Pfam WD40-like Beta Propeller Repeat 592 609 IPR011659 -
Psa5g1994 697 Pfam WD40-like Beta Propeller Repeat 533 571 IPR011659 -
Psa5g1994 697 Pfam WD40-like Beta Propeller Repeat 487 521 IPR011659 -
Psa5g1994 697 PANTHER DPP6 N-TERMINAL DOMAIN-LIKE PROTEIN 30 678 - -
Psa5g1994 697 Gene3D - 404 583 IPR011042 -
Psa5g1994 697 SUPERFAMILY DPP6 N-terminal domain-like 162 442 - -
Psa5g1994 697 Gene3D - 587 659 IPR011042 -
Psa5g1994 697 PANTHER DPP6 N-TERMINAL DOMAIN-LIKE PROTEIN 30 678 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1994 Psa-Chr5 154645612 154648180 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1994 - - mtr:MTR_3g088425 1182.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g1994 5 154645612 154648180 Psa5g1994 5 154645612 154648180 ECH