Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1961 ATGGCATCATTATGTCATAATGCCTTTTCATTTTCACCTACAAAACTTTTCCCTATCATGTTAAAGCCATCTTTCAGATGCTCCTCCATTACTACTAATTCCACACCTTCCTACAATTCCATTGTTTTTGAGACTGTTAGGCTATTGGGTCCTCCAACAAAATTTGAAGCTTCAAAGCTGAAGGTTGTTCTATTGGAAGATCAGATTAACAGATATGCAAGTATTATCCCAAGAACCTACATTCTATCCCACTGTGATTTAACAGCTAATCTCACTTTAGCTGTTTCCAATGTCATCAAACTCGAGCAGTTGAGAGGGTGGTACCAGAAGGATGATGTTGTAGCTGAATGGAAGAAAGTGAAGAATGAAATGTGCCTACATGTTCATTGCTTTGTTAGTGGTCCTAATTCCTTCCTAGATCTCGCTGCTGAGTTTAGATATCACATTTTCTCCAAGGAAATGCCTTTGGTACTCAAAGCAATTCAATGCGGAGATTCTGAACTTTTCCACGAGCATCCAGAATTGCTGGATTCTATCGTTAGAGTATATTTCCATTCTAGCTCAAAAATATACAACAGAATGGAATGTTGGGGGCCTTTAAGGGATGCAATGGAGGGAAAACGAGGCGATCAGTTACAAGGGTTGATAAACAGAGATCGTCCTCCTGAAGAATGGAGAAGCCCAATGTCCACATTCCAAGCTCTTTTTGCTATTCTTCTTTCAAATGTATTACTGGTAACTTGGTTGATTTGTTTATATCCCGATTCTTTCCTCAGCTAG 780 0.3923 MASLCHNAFSFSPTKLFPIMLKPSFRCSSITTNSTPSYNSIVFETVRLLGPPTKFEASKLKVVLLEDQINRYASIIPRTYILSHCDLTANLTLAVSNVIKLEQLRGWYQKDDVVAEWKKVKNEMCLHVHCFVSGPNSFLDLAAEFRYHIFSKEMPLVLKAIQCGDSELFHEHPELLDSIVRVYFHSSSKIYNRMECWGPLRDAMEGKRGDQLQGLINRDRPPEEWRSPMSTFQALFAILLSNVLLVTWLICLYPDSFLS* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1961 259 PANTHER PROTEIN STAY-GREEN LIKE, CHLOROPLASTIC 24 240 - -
Psa5g1961 259 Pfam Staygreen protein 54 203 IPR024438 -
Psa5g1961 259 PANTHER PROTEIN STAY-GREEN 1, CHLOROPLASTIC-RELATED 24 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1961 Psa-Chr5 151800470 151803760 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1961 K22013 - gmx:100795181 363.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g1961 5 151800470 151803760 Psa5g1961 5 151800470 151803760 ECH