Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1946 ATGGGTGCAGTTTGTTGGCCATATTTTGATCCTGAGTATGAGAATTTCAGCAACAGAATCAACCCTCCAAGGGTATCAGTGGACAATTCTAGTTGCCATAACTGTACACTAATCAAGTTTGATAGTGTTAACAAACCTGGAATTCTGCTGGAAGTTGTGCAAATTTTGACAGACCTTGACTTTATAATTACCAAAGCTTACATATCTTCTGATGGGGGATGGTTCATGGATGTATTTCATGTCACGGATCAGCATGGGAAAAAGATAACAGATGACAAAACCATTGACCTCATTGAAAAGGCTCTAGGACCGAAAAGCCAGAGTAAAGAAGGAGTGAAGAGTTGGACCGGAAAACGGGTTGGGGTGCATTCCGTTGGCGATCATATAGCCATTGAGCTAATCGGGAGAGACCGCCCCGGTCTCTTGTCTGAGATCTCAGCTGTTCTTGCCAGCCTCCATTTTAACGTGGTTGTAGCTGAAGTTTGGACTCATAACCGAAGAATAGCTTGCGTCCTTTATGTCAATGATGGTACGAGAAAAGCCGTGGACGATCCAAAAAGATTGTCTCTTGTGGAGGAGCAGCTCAATAACATCTTACGCGGATGCGAGGATGGTGATAAAGTTGCTAGTAGAACTAGTCTCTCCATGAGTTTCACCCATATCGATAGGCGACTCCACCAGATGTTGTTTGCTGATCGAGATTATGAAAGTTCTGGAGTAACCACGACAGAAAGTGAATGTCCTCCCTCTTTCTGGCCAAAAATAGCGATAGAATGTTGCGAGGAAAAAGGTTACTCAGTGGTTAGTGTCAGGTGCAAAGATCGCGCAAAACTCATGTTTGACATTGTTTGCACTCTTACTGATATGCAATATGTTGTTTCCCATGCCACAATCTCATCAGACAAACCTTATGCATCCCAGGTACACCACATTAATACTCTCATTTTCGCGTCTCCACTTAAACGGTTCAAATACACAGGGTAA 984 0.4329 MGAVCWPYFDPEYENFSNRINPPRVSVDNSSCHNCTLIKFDSVNKPGILLEVVQILTDLDFIITKAYISSDGGWFMDVFHVTDQHGKKITDDKTIDLIEKALGPKSQSKEGVKSWTGKRVGVHSVGDHIAIELIGRDRPGLLSEISAVLASLHFNVVVAEVWTHNRRIACVLYVNDGTRKAVDDPKRLSLVEEQLNNILRGCEDGDKVASRTSLSMSFTHIDRRLHQMLFADRDYESSGVTTTESECPPSFWPKIAIECCEEKGYSVVSVRCKDRAKLMFDIVCTLTDMQYVVSHATISSDKPYASQVHHINTLIFASPLKRFKYTG* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1946 327 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 4 312 IPR040217 -
Psa5g1946 327 Pfam ACT domain 37 85 IPR002912 -
Psa5g1946 327 Pfam ACT domain 131 198 IPR002912 -
Psa5g1946 327 SUPERFAMILY ACT-like 32 106 IPR045865 -
Psa5g1946 327 SUPERFAMILY ACT-like 125 200 IPR045865 -
Psa5g1946 327 ProSiteProfiles ACT domain profile. 130 211 IPR002912 -
Psa5g1946 327 PANTHER FOUR ACT DOMAIN ACT DOMAIN PROTEIN WHICH PROTEIN 4 312 - -
Psa5g1946 327 Gene3D - 128 201 - -
Psa5g1946 327 CDD ACT_ACR_1 35 105 - -
Psa5g1946 327 ProSiteProfiles ACT domain profile. 37 114 IPR002912 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1946 Psa-Chr5 151321162 151327003 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1946 - - gmx:100789044 530.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g1946 5 151321162 151327003 Psa5g1946 5 151321162 151327003 ECH