Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1909 ATGAATCCAAGCCATCTCATAACCTCACAATCTCAAATAATATCCACTTACAAACACACTTCACAATTTCATCATACCCAACAAATTAAAAACCACCACAACACTAGAAGCTTATCCACAACAAGTGCTGAAAACCCTCCCTTCATTTTCCCCAAACTATTCAGTAGAGTTACATACACAGAAAATAACATGGCCCTTGAGAGTTGTTTAAGAGTATCCACACCAAGACCTCATTGTCTTCCTCCATTGTTTTCATCTTCAAGGGAAAAGCTTGTTTTCTCACCTCAAAAAGTAGGATTCAAGAAAGCTTTGCTGAACTCAACAGTTTCACTTCCGTCTGGTGTTGCTTATAGAAAATCACGTTTTGTTTGCAATGCTCGTGAAGCTGTAAATGAAGTTCAAGTAGTGAATGACTCAAGCTGGGATGAACTTGTGATTGGAAGTGAAACACCTGTGCTTGTAGATTTTTGGGCACCATGGTGTGGTCCATGCAGAATGATAGCGCCTATAATTGATGAATTAGCCAAAGAGTATGCTGGAAAAATTAAGTGCTACAAGCTCAACACAGATGAATCTCCAAACACTGCAACAAAGTATGGAATCAGAAGCATACCAACTGTTCTGTTTTTCAAGAATGGAGAGAAAAAAGACAGTGTAATTGGTGCAGTTCCTAAGGCTACTCTGTCTGAAAAAGTGGAAAAGTATATTTGA 711 0.3854 MNPSHLITSQSQIISTYKHTSQFHHTQQIKNHHNTRSLSTTSAENPPFIFPKLFSRVTYTENNMALESCLRVSTPRPHCLPPLFSSSREKLVFSPQKVGFKKALLNSTVSLPSGVAYRKSRFVCNAREAVNEVQVVNDSSWDELVIGSETPVLVDFWAPWCGPCRMIAPIIDELAKEYAGKIKCYKLNTDESPNTATKYGIRSIPTVLFFKNGEKKDSVIGAVPKATLSEKVEKYI* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1909 236 ProSiteProfiles Thioredoxin domain profile. 96 236 IPR013766 -
Psa5g1909 236 CDD TRX_family 139 233 - -
Psa5g1909 236 Pfam Thioredoxin 133 233 IPR013766 -
Psa5g1909 236 PANTHER GEO12009P1 112 236 - -
Psa5g1909 236 Gene3D Glutaredoxin 133 236 - -
Psa5g1909 236 SUPERFAMILY Thioredoxin-like 120 235 IPR036249 -
Psa5g1909 236 PANTHER THIOREDOXIN M-TYPE PROTEIN 112 236 - -
Psa5g1909 236 PRINTS Thioredoxin family signature 152 160 - -
Psa5g1909 236 PRINTS Thioredoxin family signature 160 169 - -
Psa5g1909 236 PRINTS Thioredoxin family signature 200 211 - -
Psa5g1909 236 TIGRFAM thioredoxin: thioredoxin 137 235 IPR005746 GO:0015035
Psa5g1909 236 ProSitePatterns Thioredoxin family active site. 153 171 IPR017937 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1909 Psa-Chr5 147196472 147197983 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1909 K03671 - gmx:100500292 271.166
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g1909 5 147196472 147197983 Psa5g1909 5 147196472 147197983 ECH