Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1899 ATGCATTTACTGGGTTTGTTCAGTTTTTGGATTTCATTCACAAAGTTTAGAACTTTATTCTCAGTTTTGGGTTTTAGTAACAAAACTATGAAGGGTAAATGCAATGTTTGGATCTTAGTTTCTTTCAATGTGTTACTCACAATTGGGTCTTTGATTTCCTTCATGTTAGTCTTTTCATGGATTTACTCATATGCGTTTTCTACTCATAGTTCAGTGATTAGGAGTTATGAGATTAATGCTAACACTAGTAATTCTCATTTACATGTTCAGAGCTATGTTCAGGCTTTAAATTTTAATGTTTCGAGGGATGCATGCAATGTGTTTGATGGAAGTTGGGTTCGGGATGACAGTTATAGTTACCCTTTATATGATGCTGATGCATGTCCGTTTGCAGAAAGAGGTTTTAATTGTTTTGCTAATGGGCGTAAAGATAGAGATTATACGAAATGGAGATGGAAACCGAATAACTGTGATATTCCAAGGTTTGATGCAGGGAGAATGCTCGAACAGCTTCGTGGGAAAAGGGTTGTTTTTGTTGGTGATTCATTGAGTAGGACTCAATGGGAGTCTTTGGTATGTTTGTTAATGACAGGAGTTGAGGATAAGACGAGTGTTTATGAAATCAAAGGCAATAAGATTACGAGACAGATTAGGTTTCTAGGTGTGAGATTTAGTTCTTTTGATGTTAGGATTGATTTTTATCGGTCTGTTTTTTTGGTGAAGCCTGGTCGGGCTCCTAGATTTGCGCCGAAAAGGGTGAAGACAACACTGAAATTGGACAAGATCGATGATATTAGTCATGAATGGGTTGATTCGGATGTTCTTATATTCAACTCAGGTCACTGGTGGACAAGGACTAAGCTTTTTAATATACAGGGGCTGGTATTTTCAGGTTGGTAG 900 0.3722 MHLLGLFSFWISFTKFRTLFSVLGFSNKTMKGKCNVWILVSFNVLLTIGSLISFMLVFSWIYSYAFSTHSSVIRSYEINANTSNSHLHVQSYVQALNFNVSRDACNVFDGSWVRDDSYSYPLYDADACPFAERGFNCFANGRKDRDYTKWRWKPNNCDIPRFDAGRMLEQLRGKRVVFVGDSLSRTQWESLVCLLMTGVEDKTSVYEIKGNKITRQIRFLGVRFSSFDVRIDFYRSVFLVKPGRAPRFAPKRVKTTLKLDKIDDISHEWVDSDVLIFNSGHWWTRTKLFNIQGLVFSGW* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1899 299 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 34 291 IPR029962 GO:0016413
Psa5g1899 299 Pfam PMR5 N terminal Domain 104 158 IPR025846 -
Psa5g1899 299 PANTHER LEAF SENESCENCE RELATED PROTEIN-LIKE 34 291 - -
Psa5g1899 299 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 159 295 IPR026057 GO:0016740
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1899 Psa-Chr5 146528491 146531896 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1899 - - gmx:100784384 452.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g1899 5 146528491 146531896 Psa5g1899 5 146528491 146531896 ECH