Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1884 ATGAAACTTACGCGCAACCGCGACATTCAATTCTTGTCATTCCCTTCCCAATCAACACAAAGTTGGTTCGATTCGATGGAGTACGAATATAACAGAAGCAGGTCAAGCCCCCAAGTTCCGATGTACCGCGCTCCGCCCTCTTCCATCTACCCCAAGATCGGCCCTCACCCTCAAACCGCCGCTCCTCCCCCGCCTCGTCCGTTTCCTTATCAGCACAATCCCACTCCTTCACCTTCTCTAGGATTGGGGATTAAGGTTGCCATCAAGCCGGAATTTAGGATCACACAGCCGCCTCATTTATTACCACATGTGGGAGATATTCCACGGAGCAACTTCCAATTTGATTTTGGGTTGGAGAGGAAAGTTTTGGCCGAAGCAGAGAAGGATAACCCAAATTGGAGCAAATTTGGCGTAGACAATCTTCCGACTAAAGCTTCTGATGCATCCTCATCAAAGGTTACTTCTTCAGATCCCATTGTGAGCAAGTATATAGCCATGGGACTCGGCCGAGAGGCAGTTCAAATTGCTGTTACAAATTATGGTGATAATCCAACCAAAGTTCAAGAATTTGTCAATGGATACACCCTTCTGCGTGAAATGGGATTTTCATCAAGCAGCGTTGCAGAAGCCTTAGTTATGCATGACAATAATACAGACAAGGCATTGGCACATTTCCTTAATGGCTCATCATGA 693 0.4646 MKLTRNRDIQFLSFPSQSTQSWFDSMEYEYNRSRSSPQVPMYRAPPSSIYPKIGPHPQTAAPPPPRPFPYQHNPTPSPSLGLGIKVAIKPEFRITQPPHLLPHVGDIPRSNFQFDFGLERKVLAEAEKDNPNWSKFGVDNLPTKASDASSSKVTSSDPIVSKYIAMGLGREAVQIAVTNYGDNPTKVQEFVNGYTLLREMGFSSSSVAEALVMHDNNTDKALAHFLNGSS* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1884 230 CDD UBA2_UBAP1_like 190 226 - -
Psa5g1884 230 Gene3D UBAP1 SOUBA domain 144 229 IPR042575 -
Psa5g1884 230 PANTHER LD44032P 32 230 IPR038870 GO:0000813|GO:0043130|GO:0043162
Psa5g1884 230 SUPERFAMILY UBA-like 186 228 IPR009060 GO:0005515
Psa5g1884 230 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 186 228 IPR015940 -
Psa5g1884 230 PANTHER BNAA03G12290D PROTEIN 32 230 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1884 - - cam:101496118 322.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g1884 5 145110231 145114554 Psa5g1884 5 145110231 145114554 ECH