Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1883 ATGCAGAGCAAGGGATCGAAACACCGATTTTCCACTATGGCGAATCGATCCCGAATTCCTTCACTATTCATCTCCATGTTCGCCACTTTCGCTTCTATCTACGTCGCCGGAAGGTTGTGGCAGGACGCACAGAATCGTGTTTATCTCATCAAAGAGCTCGATAGGATCACTGGTCAGGGACAATCTGCTATATCAGTGGATGATACATTGAAGATCATAGCCTGCAGGGAACAACATAAGAAGCTTGATGCACTTAAGGTGGAACTTGATGCTGCCAAAAAAGAGGGTTTTGTTTCAAAGGGATTGATTGAGAGCAATGGGACTTACTCTAAGAGAAGGCCTTTGGTAGTCATAGGTATATTGACAAAGTTTGGCCGCCAGAAGAATAGAGATGCCATTCGCAAGGCTTGGATGGGAAATGGTGCATCTTTGAAGAAAATTGAAGATGGAAAGGGCATCATTCTGCGATTTGTTATTGGTAGAAGTGCAAATCGCGGGGACAGTCAAGATAAAGACATTGATCGTGAGAATGGGTTGACGAATGACTTCCTAATTCTAGAGGATCACGTGGAAGGATCCCAGGGGAACGCAGAGAAGGCTAAATTGTTTTTTGCTCACGCCGCAGATGAATGGGATGCGGAGTTTTATGCCAAAGTCAATGATGATGTTTATGTAAATATTGATGCCTTGGGAGCTACACTTGCAACTCATTTGGACAAACCTCGGATTTACATGGGATGCATGAAATCAGGCGAAGTTTTCTCTGAACAGAACCATAAATGGTATGAACCAGAGTGGTGGAAGTTTGGTGACAAAAAATCATACTTTCGTCATGCATCGGGAGAGATGTATGTTATATCACAAGCTTTGGCTAAATTCATATCAATAAACAGATCCATTCTTCGTACCTATGCACATGATGACGTGAGTGCTGGATCCTGGTTTATTGGACTTGATGTGAAGCATATTGACGAGACAAACTTTTGTTGCTCTTCTTGGTCAACAGGAGCAATTTGTGCAGGTGTTTGA 1029 0.4295 MQSKGSKHRFSTMANRSRIPSLFISMFATFASIYVAGRLWQDAQNRVYLIKELDRITGQGQSAISVDDTLKIIACREQHKKLDALKVELDAAKKEGFVSKGLIESNGTYSKRRPLVVIGILTKFGRQKNRDAIRKAWMGNGASLKKIEDGKGIILRFVIGRSANRGDSQDKDIDRENGLTNDFLILEDHVEGSQGNAEKAKLFFAHAADEWDAEFYAKVNDDVYVNIDALGATLATHLDKPRIYMGCMKSGEVFSEQNHKWYEPEWWKFGDKKSYFRHASGEMYVISQALAKFISINRSILRTYAHDDVSAGSWFIGLDVKHIDETNFCCSSWSTGAICAGV* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1883 342 Gene3D - 109 335 - -
Psa5g1883 342 Coils Coil 75 95 - -
Psa5g1883 342 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 1 336 IPR002659 GO:0006486|GO:0016020|GO:0016758
Psa5g1883 342 PANTHER HYDROXYPROLINE O-GALACTOSYLTRANSFERASE HPGT1 1 336 - -
Psa5g1883 342 Pfam Galactosyltransferase 129 324 IPR002659 GO:0006486|GO:0016020|GO:0016758
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1883 Psa-Chr5 145051996 145062407 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g1883 21 342 Glycosyltransferase AT5G53340 71.118 9.27e-178 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1883 K20854 - gmx:100779561 615.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g1883 5 145051996 145062407 Psa5g1883 5 145051996 145062407 ECH