Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1861 ATGTTTGCAGAAACTCTTCGTTTGGCTGTTGCTGTTCTTGGCAATGCTGCCTCAGTTTCACTTTATGCTGGGCCAATTGTTACATTTAGAAGTGTTATAAGGAAGAAAAGCACAGAGGAATTTTCATGCATTCCTTACATGATAGGATTGTTGAACTCTCTCCTTTTCACATGGTATGGGTTACCTGTGGTAAGCAACAAATGGGAAAATGTTCCTGTTGTAACCGTTAATGGAGTTGGAGTTGTTCTTGAATTTTCCTACGTTGTTATTTATTTATTGTATTGTTCGCCCAAAGCAAAGGTGAAAGTAGCTGTGATTTCCACATTTGTTGTAGCTGTGTTCTGCATAACTGCAGCAGTTTCGGTTTTCGCCTTACATGATACTCGTCGTCGAAAGTTACTTGTTGGTAGCATAGGGTTATGTGTTTCTGTTGCATTATACGGTTCTCCTCTGGTTGCAATGAAGAAAGTTATAAAAACAAAGAGTGTGGAGTTTATGCCATTACCGTTATCTCTATGTGCTTTTTCAGCTAGTGTATTATGGTTAGGTTATGGAATTCTCATTCGGGATGTGTTTGTTGCGGGTTCAAGTGTGGTTGGAACTCCATTGAGTATTTTGCAGCTTGTGATTTACTTCAAATACAGGAAAGAGAGAGTTGTGGATGAAGCTGAAATTGAGGATTTGGAAAAGGGTGGGTTAGAGTTAGAGAAGGTAGTGGAGTTGGAGTTGGAGTTGGAGTTGGAGTTGGGGAAAGAGGAAAAGATTGTCACAAATTGTGAACAACAATAA 789 0.3942 MFAETLRLAVAVLGNAASVSLYAGPIVTFRSVIRKKSTEEFSCIPYMIGLLNSLLFTWYGLPVVSNKWENVPVVTVNGVGVVLEFSYVVIYLLYCSPKAKVKVAVISTFVVAVFCITAAVSVFALHDTRRRKLLVGSIGLCVSVALYGSPLVAMKKVIKTKSVEFMPLPLSLCAFSASVLWLGYGILIRDVFVAGSSVVGTPLSILQLVIYFKYRKERVVDEAEIEDLEKGGLELEKVVELELELELELGKEEKIVTNCEQQ* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1861 262 Pfam Sugar efflux transporter for intercellular exchange 11 98 IPR004316 GO:0016021
Psa5g1861 262 Pfam Sugar efflux transporter for intercellular exchange 134 217 IPR004316 GO:0016021
Psa5g1861 262 Gene3D - 136 225 - -
Psa5g1861 262 Gene3D - 11 107 - -
Psa5g1861 262 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET 5 243 - -
Psa5g1861 262 PANTHER RAG1-ACTIVATING PROTEIN 1 5 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1861 Psa-Chr5 142452198 142454021 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g1861 3 242 Miscellaneous Gene Families AT5G53190 50.607 6.16e-88 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1861 K15382 - gmx:100813119 323.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g1861 5 142452198 142454021 Psa5g1861 5 142452198 142454021 ECH