Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1853 ATGGAGAACAATAATTTTGTTCCAAATGGTCTTTTATTATCTAGTGAAGAAACATTTGTTGCTAGGGTGTTAGAAGGAAAAAGATGGTCACAAGTTGAAGAAAGAACCACAGAGCTGCTTCAATGTGTTCAGCTTAATCACAAATCAGAAGCACTTAGAAATAATATTATTTCTTACTTAAGGGGCCTCATCACTAGCCATGTCCCTTGTCAGGTTTTTGAATTTGGATCGGTACCTTTGAAGACTTACTTACCTGATGGGGATATTGATCTCACAGTTTTTGGCTTCAATCAAATTTTGCCTGAAAATTTCATTCAGGAGATTCTGCAAATCATACAGAATCAAAAGGAAAATGAGTTTGCTGAATTTAGGGTTAAAGAGGTTAAGCTTGTTCAAGCAGAGGTGAAGGTCATAAAGTGCTTGATTGAAAGTTTTGCAGTTGACATATCTTTCAACCAATTGAGCGGTTTATGTTCACTTTGTTTTCTCGAGGAGGTTAATCATTTGATAGGACATCATCATATGTTCAAGCGTAGTGTTATACTTATAAAAGCTTGGTGTTACTACGAAAGCCGCCTCCTGGGTTCCAACAGTGGACTCTTTTCAACCTATGGGTTGGAAATTTTAGTATTATACATATTTAATCTTTACAACAATGATTTTGCTGGACCACTTCAGGTACTATTTCGATTTCTGGAGTTCTTCAGTAAATTTGACTGGGAAAATTATTGCATTAGCTTGAGTGGACCAGTGCCCAAAGGTTCTCTTCCTAATATGATAGCCGAGTCTCTAAGAAAAGATTGCCGAAACCAAGAGTTACTGCTCACTGAATTGTTTCTTAATGCTTGTAAGACTTGTTATGGTAATATGCCGCGCAGTCAGGAAAATCACGAGAGACATTTTGTTACCAAACACATCGACATTATAGATCCTTTGTGTGCAGATAACAATCTGGGGCGTAGCATCAGTAAAGGTAGCTTCTTTAGGATAAAGAATGCAATTGCTTTTGGTGCTAAGAGGATGCTGAGAATTCTTGAATGCACTGATGAGAATCTAATCGCTGAATTTGATTACTTTTTCAAAACCACATGGAATAGAAATGGGAATGGTTATTGGATTCATGTAAGCGTTTATAATCTTTATATAAGAAATAAAAAAATTGGAAAGCCAACGCGTCAAGAATCTGAGGATGAGCAGGCTCTAGCTTCTCGTGAGTTTCAATATAATAACCAAAAGCCTGATAACCAATTATCAGAGATTCTGCATAAGGAAGAGCCTGATTATTTGGATGATTCAGAAAGTAGAAGGAATCTTCAGTTGAGTGGATATTTGCATGCACTGATGGGTCAGTCTGCTGCTAAGGAAGAACCTGGTGTTGGGAATATGACTGAAAGTAGCAGGATTGAATATCTGGAAGCAGTAAAAGGTGCAAAGTCAGAGAACAATGAGGTAGTGAGGCAGCAAAAGGAAGAGCATCATTTGGAGAGTACTATGGAAAGTTGTACGAGTCTCGAGTCCAATGGATACCTGCAGGCACTTTTGGGAGTGAAAAAAAGTGATGCATTTTTTTCATCACCACCACCAAACATATCTTTCTCTCTAGATGTAGTTCAATTTCCGGAACTACAAGAGTTTCCCAGTGGCAAAAGATCATTAAATTTGGGACAAGACAGTGTTCATCCACCTGCTGTAATAATCACAGATAGTATTGTGATGAACCCAGAAATCTGTAAAAACACACCAGCTTCAGACTCAACCTCAGAGACCAGACTCTCATCCTTGCTTCTGAAGCCAACTCATCCTCAAGATGTCCTTGGTCCATCAATTGAGAATGCGGACATCGTCAGGCATGAGAACACCACTGCTGAATCTGATGCCTTAAATCTTCATGCGCTTCAATCACCATATGCATCTGGTTCATCTGAGATACAATTTCCATTCTCAATTAGCAATAGCAGTCATGTTGAAGCTTCGCATTATATAGGGAACCAATTTTCAGATATTTTTAATGGTGATTTTGTAAAATATTGGACAAATCTTCAATATGGGCGATATTGTGAGATTGGACCATTAGAGGAGCCTTTGCTTCATCCTCCCACTTTTGAACTGCCGATGGATTTTCAAGAGCAATATCATTTGAAAAGGAGGCCTTCAAGTTCTGCGAACGTTGTGGCTCCCATAGTTCCTGACATGCCACCAATACTTGCTTCTGACTCGCATGAAGGCATAAATCAAAGCGTTTCTTTTTGGCTTCCCAAATTTAGTGGAGGCACTGGGTCCTTCATGCCAAATCCACTTGCTTACGACCAGAGATATTACAACCGTGAGCTTTCCAACAAACATCAGATTGCAAATTATAGATCTGAGAGACCTGGGAATTCGAATTATGACTCAAGGGGAAGGGCTTCTAGATCCAACAATGTGCCAAGAAATTCTAATTCTAATTTCAGGGAAAGGTTTTCCAGCCGTGGCCAGAATTATTATAGACAACGTGAGAAACCAGAAGGTAAAAAGAAAGCATTGCATCAAGGTGAAGGGTCGAGTAGTGCCGTTAAAGAACTTAAAAAATTTGAAAAGGGCTCTAAAGATATTTCTCCACATCAGCCCTGA 2610 0.39 MENNNFVPNGLLLSSEETFVARVLEGKRWSQVEERTTELLQCVQLNHKSEALRNNIISYLRGLITSHVPCQVFEFGSVPLKTYLPDGDIDLTVFGFNQILPENFIQEILQIIQNQKENEFAEFRVKEVKLVQAEVKVIKCLIESFAVDISFNQLSGLCSLCFLEEVNHLIGHHHMFKRSVILIKAWCYYESRLLGSNSGLFSTYGLEILVLYIFNLYNNDFAGPLQVLFRFLEFFSKFDWENYCISLSGPVPKGSLPNMIAESLRKDCRNQELLLTELFLNACKTCYGNMPRSQENHERHFVTKHIDIIDPLCADNNLGRSISKGSFFRIKNAIAFGAKRMLRILECTDENLIAEFDYFFKTTWNRNGNGYWIHVSVYNLYIRNKKIGKPTRQESEDEQALASREFQYNNQKPDNQLSEILHKEEPDYLDDSESRRNLQLSGYLHALMGQSAAKEEPGVGNMTESSRIEYLEAVKGAKSENNEVVRQQKEEHHLESTMESCTSLESNGYLQALLGVKKSDAFFSSPPPNISFSLDVVQFPELQEFPSGKRSLNLGQDSVHPPAVIITDSIVMNPEICKNTPASDSTSETRLSSLLLKPTHPQDVLGPSIENADIVRHENTTAESDALNLHALQSPYASGSSEIQFPFSISNSSHVEASHYIGNQFSDIFNGDFVKYWTNLQYGRYCEIGPLEEPLLHPPTFELPMDFQEQYHLKRRPSSSANVVAPIVPDMPPILASDSHEGINQSVSFWLPKFSGGTGSFMPNPLAYDQRYYNRELSNKHQIANYRSERPGNSNYDSRGRASRSNNVPRNSNSNFRERFSSRGQNYYRQREKPEGKKKALHQGEGSSSAVKELKKFEKGSKDISPHQP* 870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1853 869 SUPERFAMILY Nucleotidyltransferase 45 192 IPR043519 -
Psa5g1853 869 MobiDBLite consensus disorder prediction 783 823 - -
Psa5g1853 869 CDD NT_PAP_TUTase 52 159 - -
Psa5g1853 869 PANTHER NUCLEOTIDYLTRANSFERASE 3 846 - -
Psa5g1853 869 MobiDBLite consensus disorder prediction 402 416 - -
Psa5g1853 869 PANTHER PAP/OAS1 SUBSTRATE-BINDING DOMAIN SUPERFAMILY 3 846 - -
Psa5g1853 869 MobiDBLite consensus disorder prediction 849 869 - -
Psa5g1853 869 Gene3D - 154 360 - -
Psa5g1853 869 SUPERFAMILY PAP/OAS1 substrate-binding domain 175 345 - -
Psa5g1853 869 Gene3D Beta Polymerase, domain 2 46 153 IPR043519 -
Psa5g1853 869 MobiDBLite consensus disorder prediction 824 842 - -
Psa5g1853 869 MobiDBLite consensus disorder prediction 389 416 - -
Psa5g1853 869 MobiDBLite consensus disorder prediction 783 869 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1853 Psa-Chr5 142044878 142051371 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1853 - - mtr:MTR_3g090990 802.742
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g1853 5 142044878 142051371 Psa5g1853 5 142044878 142051371 ECH