Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1796 ATGTTCTTACTATTTGGAATGTTAGGCCTGCAGGAGATTCAAGTAATGATGGTAAGTAAAGCCAATGTTGTTGTTGATAATGATAATGATAATGATGATGATGAAGTTGAACTTGAGAAAAATTATGTCACCGTACGTGATTGCGACTGCAGCGCAGCACTCATTCAAGAAATCATGTTTCAACCAACAAGCAACAGCAGCAACCAGGATTTGGTTCATACCATGCCACAGTCTCTCCAAGGGACCTCGACATCAGTGCCAACGGATCTGAGTGAAAGCTCCATGGACACAAAAGACAACTTGCAAAATAGAGAATTTATAAATGCAGAAAATATCATCAGGCACTCCCAGAAACTACAAGGGGATCTGCAAGTGTTTGGGATGAAAATTAAGCAGCATGAGGACAGGCTGAGTCTTTTGAACATGGAAAAAGTCAAATTAGAAGACTCCATTATTCATTTGCAAGTTGCTATTGGGAAATCAAAGTCTTCAAGCACAACAAAGATTGATAATGCAGAGGAGGAGGTAGATAAACAAATATTGCAGCATGAAAAATCTGCTGCTAGTGTTTTGTGCCAGATAAAGACTCGTTATGGAGCGCATGCTTCTCTTCTTACACTAAGAAAGGAGGTTATAGGTATTGTTCCTATGCTGGGAAGAGTTGAGGATGACAATCTCAGCAGACTTTTCTCTGAGTATCTCGGAGTGGAGACTATGTTGGCAATTGTTTGTAAAACTTCTGAAGGAGTTAAAGCTATCGAAATGTATGACAAGGAAGGCTGCATAAATAAAAGTAGCGGTCTTCATGGGCTAGGTGCAACTATTGGAAGGGCTTTGGACGGTCGATTTTTAGTCATATGTCTTGAATCCCTAAGGCCTTATGCTGGTAAATACGTGGTTGATGATCCACAGAGGAAGTTGGACATTTTAAACCCAAGATTGCCCAATGGGGAGTGTCCGTCTGGATTTCTTGGGGAAGATGTTAATCTGAGATTCCTCAGACCAGAAAGATCAGCGGGGCTTGATGAACAAGTTGAAATTGAGAAGAAAATGAAGGATGCCCAGTTGAAGAAGGAAAAAATTTTGGAAGATCTAAAAAGGGAAAGGACATTATTGGACACGGTGAAGCACAATTTCAGCAAAAAGAAGATTGATTTTCTCAAGTATTTGGCTTCAAGTTCATCATCATATGCAACCCCGGTTCAGAATGCTCCTTCCGTACCCTGA 1227 0.4059 MFLLFGMLGLQEIQVMMVSKANVVVDNDNDNDDDEVELEKNYVTVRDCDCSAALIQEIMFQPTSNSSNQDLVHTMPQSLQGTSTSVPTDLSESSMDTKDNLQNREFINAENIIRHSQKLQGDLQVFGMKIKQHEDRLSLLNMEKVKLEDSIIHLQVAIGKSKSSSTTKIDNAEEEVDKQILQHEKSAASVLCQIKTRYGAHASLLTLRKEVIGIVPMLGRVEDDNLSRLFSEYLGVETMLAIVCKTSEGVKAIEMYDKEGCINKSSGLHGLGATIGRALDGRFLVICLESLRPYAGKYVVDDPQRKLDILNPRLPNGECPSGFLGEDVNLRFLRPERSAGLDEQVEIEKKMKDAQLKKEKILEDLKRERTLLDTVKHNFSKKKIDFLKYLASSSSSYATPVQNAPSVP* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1796 408 Coils Coil 344 371 - -
Psa5g1796 408 PANTHER PROTEIN DEFECTIVE IN MERISTEM SILENCING 3 324 398 - -
Psa5g1796 408 PANTHER PROTEIN DEFECTIVE IN MERISTEM SILENCING 3 101 330 - -
Psa5g1796 408 Coils Coil 130 150 - -
Psa5g1796 408 PANTHER EN/SPM-LIKE TRANSPOSON-RELATED 324 398 - -
Psa5g1796 408 PANTHER EN/SPM-LIKE TRANSPOSON-RELATED 101 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1796 Psa-Chr5 138710938 138716601 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1796 - - gmx:100809510 355.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g1796 5 138710938 138716601 Psa5g1796 5 138710938 138716601 ECH