Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1791 ATGGAGTCTCTGGAAATTCCTCGTCTCCTTCTCCATCACCATCCCCATCCCCGGGCATCTTCATCTCCAACTCCATCTCGACCTCTTTCCAATTCAAGATTCTTGCCGCAATTGGTTTTCCCTTCTAACCTCAAAAAAGCTACTAAAAATGCCACTCTGCGATCAATTTCCGGTGACACTGACGGTGGTTCCCCCGCTTCACCGGACGGACCTGTTTCCTTCGAAGATGATGAAATTCAACAACGTGATGAGGATAGGGCTCTCTTGTTGTCTAGAGAGATGGATGATTTTGGCTCTCTAGTTGGATTTCGCTTGGCTACTACTGACTCTGGGAAAACTACTACTGACACTCCACGGGGTTTAAGGAGTGATGAAGTTGAAGAACCGGAGGATAAAAATGTAGGAGAAGATAAGGCTCAGACTAGAGTGTCTCACAACATTGTTTTTGTTACATCCGAAGCTGCGCCGTATTCTAAAACTGGCGGACTTGCAGATGTTTGTGGTTCTTTGCCAATAGCGTTGGCAGGTCGTGGACACCGTGTTATGGTTATCTCTCCTAGATACCAACATGGTACTGCTGCAGATAAGAAGTTTTCTGGTGCAGTTGATCTTGATAGAAATATCAAGGTATTTTGCTTTGGTGCTGCTCAAGAAGTTGGCTTTTACCATGAGTATAGGGAAGGGGTTGATTGGGTATTTGTCGATCACCCTTCATTCCATAGACCAGGGAATCCGTATGGGGACAAGATTGGGACTTTTGCGGATAATCAGTTTCGGTTCACTTTACTTTCCCATGCAGCATGTGAAGCCCCATTGGTGCTTCCATTGGGAGGTTTCACTTATGGAGAAAAATGTCTGTTCCTCGTTAATGATTGGCATGCCAGCCTAGTTTCAGTACTTTTGGCAGCCAAGTATCGTCCGTATGGGGTATATAAGGATGCACGTAGTATATTAGTGATTCACAATATTGCACACCAGGGAGTGGAACCTGCAATTACATATGGCAATTTGGGGCTTCCTCATGAATGGTATGGAGCACTGGGATGGGTGTTCCCTACATGGGCGAGGACGCATGCTCTTGACACAGGCGAAGCTGTCAATTTTCTAAAAGGCGCCATTGTTACAGCTGATCGGATAGTAACAGTAAGCAAGGGCTATTCATGGGAGATAACAACTAACGAAGGTGGATTCGGTCTACATGAAATATTACGCGATAGAAAAAGTATTCTCAACGGGATCACCAATGGAATTGATGTTACTGAATGGGACCCATCATCTGATGAACATCTTGCTAGCAACTACTCTGCTGACGACCTTTCTGGGAAGGTGAAATGTAAGGTTGCCTTGCAGAAGGAATTGGGTCTTCCAGTGAGGCCTGACTGTCCGATGATTGGATTTGTTGGAAGACTTGATTACCAGAAAGGTATTGAGCTGATTCGTGTGGCAATTCCAGAGCTTATGCAAGATGATGTTCAGTTTGTAATGCTTGGTTCAGGAAATCCTATTTATGAAGATTGGATGAGAGCAACGGAGTCAATTTATAAAGATAAATTCCGTGGTTGGGTTGGATTTAATGTTCCAGTATCTCATAGAATAACTGCAGGCTGTGATATACTGCTAATGCCATCAACGTTCGAGCCATGTGGACTAAATCAGTTATATGCAATGAGATATGGAACTATACCAGTGGTTCATGAAACCGGGGGACTAAGAGATACAGTTCAAAATTTTAATCCATTTGCTGTAGGAAGCAATGCCGAAGGATGCAATGCTGAAGGCACAGGGTGGACATTTACTCCGTTGACAAAGGAGAGCATGTTAGTGGCTCTAAGATACGCCATTCAAACGCTTAACGAACACAAGTCTTCATGGGAGGGATTAATGAAAAGAGGTATGACGAGAGATTACACGTGGGAAAACGCCGCCACTCAATACGAGCAAATCATTGAGTGGGCATTCATGGATCCGCCCTATTGCTGA 1980 0.4444 MESLEIPRLLLHHHPHPRASSSPTPSRPLSNSRFLPQLVFPSNLKKATKNATLRSISGDTDGGSPASPDGPVSFEDDEIQQRDEDRALLLSREMDDFGSLVGFRLATTDSGKTTTDTPRGLRSDEVEEPEDKNVGEDKAQTRVSHNIVFVTSEAAPYSKTGGLADVCGSLPIALAGRGHRVMVISPRYQHGTAADKKFSGAVDLDRNIKVFCFGAAQEVGFYHEYREGVDWVFVDHPSFHRPGNPYGDKIGTFADNQFRFTLLSHAACEAPLVLPLGGFTYGEKCLFLVNDWHASLVSVLLAAKYRPYGVYKDARSILVIHNIAHQGVEPAITYGNLGLPHEWYGALGWVFPTWARTHALDTGEAVNFLKGAIVTADRIVTVSKGYSWEITTNEGGFGLHEILRDRKSILNGITNGIDVTEWDPSSDEHLASNYSADDLSGKVKCKVALQKELGLPVRPDCPMIGFVGRLDYQKGIELIRVAIPELMQDDVQFVMLGSGNPIYEDWMRATESIYKDKFRGWVGFNVPVSHRITAGCDILLMPSTFEPCGLNQLYAMRYGTIPVVHETGGLRDTVQNFNPFAVGSNAEGCNAEGTGWTFTPLTKESMLVALRYAIQTLNEHKSSWEGLMKRGMTRDYTWENAATQYEQIIEWAFMDPPYC* 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1791 659 PANTHER STARCH SYNTHASE 1, CHLOROPLASTIC/AMYLOPLASTIC 80 659 - -
Psa5g1791 659 MobiDBLite consensus disorder prediction 1 79 - -
Psa5g1791 659 MobiDBLite consensus disorder prediction 118 138 - -
Psa5g1791 659 MobiDBLite consensus disorder prediction 19 62 - -
Psa5g1791 659 TIGRFAM glgA: glycogen/starch synthase, ADP-glucose type 146 649 IPR011835 GO:0004373
Psa5g1791 659 PANTHER GRANULE-BOUND STARCH SYNTHASE 1, CHLOROPLASTIC/AMYLOPLASTIC 80 659 - -
Psa5g1791 659 CDD GT5_Glycogen_synthase_DULL1-like 146 651 - -
Psa5g1791 659 Gene3D Glycogen Phosphorylase B; 165 648 - -
Psa5g1791 659 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 144 653 - -
Psa5g1791 659 Hamap Glycogen synthase [glgA]. 145 652 IPR011835 GO:0004373
Psa5g1791 659 MobiDBLite consensus disorder prediction 108 138 - -
Psa5g1791 659 Pfam Glycosyl transferases group 1 462 606 IPR001296 GO:0016757
Psa5g1791 659 Pfam Starch synthase catalytic domain 146 404 IPR013534 -
Psa5g1791 659 Gene3D Glycogen Phosphorylase B; 419 635 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1791 Psa-Chr5 138521064 138527116 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g1791 104 649 Glycosyltransferase AT3G01180 47.197 2.22e-163 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1791 K00703 - gmx:100807354 1040.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g1791 5 138521064 138527116 Psa5g1791 5 138521064 138527116 ECH