Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1790 ATGGATACAGCTTCAATGATTTCGAATCCTGACCTAATCCACTATCTATGCATTGCAAAATCAACAACAATTCTCGCACATCACATCAAAGATTCCAAAGATTCATCCACCATAGAAACATTAGCATCTAAATGCTTACAACATTCCCCTCCCAATCATTCCTTTTTCTCTCACACCGTTAATAATCGCACCTACACCTTCATTATCCAACCACCCTTCGTTCTCTTCGCAATCTTCGATCACAACCTTCTCAAATCACACGCTCTCGCTTTTCTCAACCGTATCAAATCCTCCCTCCTCCAAACCCTTGATCAAAATGCCACCTTTGCCCCTTTCTCTCTTCAGCCCCAATTCGATTCTGTTTTGAACGAAACCCTAAACTTCTACGACCTATCTTCTAATCCCGATAGCTCCGTGATTTCGCCGACGAATTCGCGAACCCTCCTCGTGAAACCTGATGAAGGGTTGAAGAAAAAGAAGAGAATTGTTGATGATGGCAAAGAAGCTGCATTGGTGGATTTATCTTCGGATGATAACAGTTCGTTGCCGTTTTCGAAGATCAATGATCGTCAGAAAGCCAAGCATATATGGAAGAAACACGTGTGGGTTGTGTTGATGCTTGATTTGTTTGTCTGCGCTGTTTTGTTTGTGATTTGGTTATGGGTTTGCAGCGGTTTCGATTGCATGGCTTATTGA 696 0.4239 MDTASMISNPDLIHYLCIAKSTTILAHHIKDSKDSSTIETLASKCLQHSPPNHSFFSHTVNNRTYTFIIQPPFVLFAIFDHNLLKSHALAFLNRIKSSLLQTLDQNATFAPFSLQPQFDSVLNETLNFYDLSSNPDSSVISPTNSRTLLVKPDEGLKKKKRIVDDGKEAALVDLSSDDNSSLPFSKINDRQKAKHIWKKHVWVVLMLDLFVCAVLFVIWLWVCSGFDCMAY* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1790 231 Gene3D Longin domain 2 134 - -
Psa5g1790 231 PANTHER PHYTOLONGIN PHYL2.2 6 230 - -
Psa5g1790 231 SUPERFAMILY SNARE-like 13 129 IPR011012 -
Psa5g1790 231 CDD Longin 15 129 IPR010908 -
Psa5g1790 231 PANTHER PHYTOLONGIN PHYL1.2 6 230 IPR044783 GO:0016021
Psa5g1790 231 ProSiteProfiles Longin domain profile. 12 122 IPR010908 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g1790 7 228 Miscellaneous Gene Families AT3G54300 24.291 1.41e-16 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1790 - - lang:109328143 235.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g1790 5 138469987 138471823 Psa5g1790 5 138469987 138471823 ECH