Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1775 ATGGAAACTTCACTTTGTGTTCCTTCTCCATCTTTCATTGCATTCAGGACGAACAAAGAGCTTCCCCATGTTCTGTCCCTGCACGACTTCAAAAGAATAACATGTTTTTCGGGTTATAATCAAAAACAAAGTTTCAATGAAAACCTTTACATTATACCCATTCGAACCATGTCTCGATTCTGCATTTCAAGGTCTTCCCCTAGGTCATTGGAACTTGGAGGGACAGGACCACCGCATAGTGATGCCCATTCACCTCCAAACGACAACCAGAGTGGCTTTGAGAAAGATTTGGAAGAGTTATTTGGTGAAGTGAAAAAAATGATCAAGATGGGGAAGAAAGATGACGCCATAGATCTGCTTAATGCAAATTATGAAATGGTGAAAGAGAGGCTTAGTGTAGGAACTAAAGGAATAGAAGAAGCTGCTATCTTAGACATACTTGCACTCGGTTACATAGCTGTTGGAGACTTGAAATTTGTTGCTTATCTATTGAATTTGTTGAAAGAAGTTGTTGATACCTTAAAAGATGATGAACCGCATCTAAATTCAATACTTATGCATATGGGAAGTATGTATGGGAAATTGAACAAGTTTGAAGAGTCGCTAGACATGTATCAAAGGGCTGTCTACATTGTGGAAAGGATTTATGGTAAGGATAGCACTATTCTTGTCATGCCGCATTTGGGTATGGCAAAAGCTCTTGGTTCAATTGGAAAAGCCACAAAAGCAATAGAGATATACCAACATGTAATCACACTTGTGGAATCAAATAAAGGTGCTGAAAGTAAGGATTTGGTTGTACCTTTACTTAGTCTTGGAAATCTTTTACTGAAAGAAGGAAGAGTCAATGATGCAGAAAGTCGTTTTACTAGGGTTCTGAACATTTACACAAAAGTATATGGAGAAAATGATGGAAGAATTGGAATGGCTATGAATTCCCTAGCTCAAGTAAAGTGTGCTCTAGGGAAGTCAAGTGAAGCAATTCATTTATTCAAAAGTGCTCTTAAGGTCATGAAGGATTCAAATTACTTGTCACCAGACAACAGTATATTGGAGAAAATGAGGGTAGATCTAGCTGAATTACTCCATACTTCTGGGAGAGGACAAGAAGGCAGAGAGATATTAGAGGAGTGCCTATTGATCACAGAGAGGTACAAAGGAAAGGAGCATCCTAGCTTAGCAACACACATGATAAATCTCGCAACTTCGTACACACGGTCAAAGAATCATGCGGAGGCCGAGCATTTGCTGAGAAGAAGTCTACAAATCATGATAAAGCATAAGGGAAGTGATGACCAGTCCATCACCTTCCCTATGTTGCAACTTGCAGCTACACTATACCATTTGAAAAATGACGAAGAAGCAGAGAAACTCGCCCTGGAGGTTTTGCGCATCCGTGAAAAGGCATTTGGAGAAGATTCTCTTCCTGTTGGGGAGGCTTTGGACTGCTTAGTGTCTGTTCAAACCAGACTTGGTAAAGATGACAGAGATTTACTGGAGCTGGTTAGAAGGATCCTGAGTATCCAAGAGAAAGGATTCGGATATGAGAGTGAGCAAGTTTTGCTTAGCTTGAAAAAAATTGTATACTACTTAGATAAGTTAGGGAGAAAAGATGAAAAGCTTCTTCTGCAGAGAAGGTTATATGTGCTTAGCAAGAAGTATAAGCACATGGTTCATCACTAA 1683 0.3951 METSLCVPSPSFIAFRTNKELPHVLSLHDFKRITCFSGYNQKQSFNENLYIIPIRTMSRFCISRSSPRSLELGGTGPPHSDAHSPPNDNQSGFEKDLEELFGEVKKMIKMGKKDDAIDLLNANYEMVKERLSVGTKGIEEAAILDILALGYIAVGDLKFVAYLLNLLKEVVDTLKDDEPHLNSILMHMGSMYGKLNKFEESLDMYQRAVYIVERIYGKDSTILVMPHLGMAKALGSIGKATKAIEIYQHVITLVESNKGAESKDLVVPLLSLGNLLLKEGRVNDAESRFTRVLNIYTKVYGENDGRIGMAMNSLAQVKCALGKSSEAIHLFKSALKVMKDSNYLSPDNSILEKMRVDLAELLHTSGRGQEGREILEECLLITERYKGKEHPSLATHMINLATSYTRSKNHAEAEHLLRRSLQIMIKHKGSDDQSITFPMLQLAATLYHLKNDEEAEKLALEVLRIREKAFGEDSLPVGEALDCLVSVQTRLGKDDRDLLELVRRILSIQEKGFGYESEQVLLSLKKIVYYLDKLGRKDEKLLLQRRLYVLSKKYKHMVHH* 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1775 560 Pfam MalT-like TPR region 180 463 IPR041617 -
Psa5g1775 560 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_6G03870) 105 543 - -
Psa5g1775 560 MobiDBLite consensus disorder prediction 71 91 - -
Psa5g1775 560 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_6G03870) 105 543 - -
Psa5g1775 560 SUPERFAMILY TPR-like 183 423 IPR011990 GO:0005515
Psa5g1775 560 ProSiteProfiles TPR repeat profile. 182 215 IPR019734 GO:0005515
Psa5g1775 560 SMART tpr_5 266 299 IPR019734 GO:0005515
Psa5g1775 560 SMART tpr_5 224 257 IPR019734 GO:0005515
Psa5g1775 560 SMART tpr_5 182 215 IPR019734 GO:0005515
Psa5g1775 560 SMART tpr_5 436 469 IPR019734 GO:0005515
Psa5g1775 560 SMART tpr_5 308 341 IPR019734 GO:0005515
Psa5g1775 560 SMART tpr_5 394 427 IPR019734 GO:0005515
Psa5g1775 560 Gene3D Tetratricopeptide repeat domain 110 349 IPR011990 GO:0005515
Psa5g1775 560 Gene3D Tetratricopeptide repeat domain 350 559 IPR011990 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1775 - - aprc:113852595 834.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g1775 5 137710477 137713469 Psa5g1775 5 137710477 137713469 ECH