Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1768 ATGTCAATGGAAGTTACTCAGGCACTTTTGAATGCTCAATCCATTGATGGAACTGTGCGTAAGCATGCTGAGGAAAGTTTGCGGCAATTTCAGGAGCAAAACCTTCCTGGTTTCTTGGTCTCTCTTTCTGGAGAGTTAGCGAATGAAGAAAAACCAGTTGATAGTCGCAAGTTGGCAGGTTTGATACTTAAAAATGCATTGGATGCCAAAGATGAAAACAGAAAGCGGGAATTGGTTCAGAGATGGTTGTCATTGGAGACCGCAGCAAAGGCCCAGTGGCCTGAGCTGATAGGATCACTTTTATCAATATTCATCAAGTTCCAAGCTCATGTCAAGCAAGCAACTTTGGAGACTCTCGGGTATTTGTGTGAGGAAGTCTCTCACGAGGTTGTTGAACAAGATCAAGTAAATAAAATTCTTACTGCTGTAGTTCAAGGTATGAATTCATCTGAAAAGAACAATGATGTCAGACTTGCTGCTACCAGGGCATTATATAATGCTCTTGGATTTGCACAGGCTAATTTTAGCAATGATATGGAGCGTGAATATATCATGAGAGTTGTTTGTGAGACAACTATGTCTCCTGAAGTGAAAATACGACAGGCAGCTTTTGAATGTTTGGTCTCAATTGCTGCCATGTATTATGTAAAATTGGCTCCTTACATCCAGGATATATATAACATCACAGCAAAGGCTGTTAGGGGTGATCAGGAGCCTGTTGCTCTCCAGGCCATTGAATTCTGGAGTACGGTTTGTGATGAGGAGACTGATATCTTGGAAGAATATGTTGGCGATACCACTGGGGATTCTGATTTACCTTGTTTTTATTTCATTAAGCAAGCCCTTCCTGCACTCATCCCTCTGCTGTTGGAAACATTACTCAAACAAGAAGAGGATCAAGATCTGGATGAAGGTGCATGGAATATTGCAATGGCAGGTGGTACATGCCTTGGTTTAGTTGCTCGCACAACTGGAGATGATATTGTGCCACTGGTAATGCCCTTCATCGAGGAGAATATTACCAAACCTGATTGGAGACAGAGAGAAGCAGCCACATATGCGTTTGGTTCTATCTTGGAGGGCCCTTCTCCAGACAAACTCATACCCCTTGTTAATCATGCTTTACCTTTTATGCTCAGTGCTTTAGTGAAGGATCCGAGCAACCATGTCAAAGACACTACTGCTTGGACTTTGGGACGAATGTTTGAATTTCTTCACAGTTCAATTGTTGGCACACCAATTATTAATGAGGGAAATGCCCAACAGATTATTACAGTTCTCCTTCAAAGCATGAAGGATGTCCCTAATGTTGCTGAGAAAGCCTGTGGAGCCCTGTATTTTCTTGCCCAGGGTTACGAGGATGTGGGACAAACATCTCCCATTACTCCCTTTTTCCAAGAAATTGTTCAAGCACTTCTCACTGTTACCCACAGAGAGGATGCTACAGAATCACGACTAAGAGCGTCAGCATACGAAACATTGAATGAAGTAGTAAGGTGTTCAACAGATGAAACAGCTCCTTTGGTTTTACAACTAGTTTCTGTCATCATGATGGAGTTACACAAATGTCTTGAAGCACAAAATCTTTCATCTGATGAAAGAGAAAAACAGAGTGAACTTATAGGCCTTCTTTGTGGATGCTTGCAAGTGATTATTCAGAAGCTAGGGTCTTCAGAACCTACCAAATATGTTTTCTCGCAGTATGCTGATCAGATAATGGGACTATTCATCAGGGTTTTTGCATGTAGAAATGCCACTGCACATGAGGAGGCCATGCTAGCTATTGGAGCCCTTGCCTATGCAATAGGCCCTGATTTTGCTAAATACCTGCCAGAATTTTACCAGTTTCTGGAGATGGACCTTCAGAATTTTGAGGAGTACCAAGTTTGTGCTGTAACTGTTGGTGTAGTAGGCGACATATGCAGGGCATTGGAGGATAAAATACTGCCTTATTGTGATGGGATTATGACGCAACTTCTCAGAAATTTGTCAAGTGATAACTTGCACCGTTCTGTGAAGCCGCCATTATTTTCATGCATTGGTGATATAGCACTTGCTATAGGAGACAACTTCAATAAGTACTTAATGTATGCAATGAACACACTACAAATTGCTGCAGAGACTTACGCCCACACATCTGCCTTTGACTTGGAAATGACAGATTACATCAACTCTCTGAGAAATGGGATATTAGAGGCATATTCTGGGATCTTCCAAGGTTTTAAGAATTCATCAAAAACCCAGCTATTGATTCCTTATGCTCCCCACATCCTCCAGTTCTTGGATAGCATATACATGGAAAAAGACATGGATGATGTGGTTATGAAAACAGCCATTGGAGTCCTTGGAGATCTAGCTGATACACTTGGAAGCAATGCTGGTTCTTTAATTCAACAATCTTTGTCAAGCAGAGATTTTTTAAATGAATGTTTGACCTCAGATGACCATATGATTAAAGAATCTGCTGAATGGGCCAAGTTGGCTATCAATCGTGCTATATCTGTTTGA 2508 0.4143 MSMEVTQALLNAQSIDGTVRKHAEESLRQFQEQNLPGFLVSLSGELANEEKPVDSRKLAGLILKNALDAKDENRKRELVQRWLSLETAAKAQWPELIGSLLSIFIKFQAHVKQATLETLGYLCEEVSHEVVEQDQVNKILTAVVQGMNSSEKNNDVRLAATRALYNALGFAQANFSNDMEREYIMRVVCETTMSPEVKIRQAAFECLVSIAAMYYVKLAPYIQDIYNITAKAVRGDQEPVALQAIEFWSTVCDEETDILEEYVGDTTGDSDLPCFYFIKQALPALIPLLLETLLKQEEDQDLDEGAWNIAMAGGTCLGLVARTTGDDIVPLVMPFIEENITKPDWRQREAATYAFGSILEGPSPDKLIPLVNHALPFMLSALVKDPSNHVKDTTAWTLGRMFEFLHSSIVGTPIINEGNAQQIITVLLQSMKDVPNVAEKACGALYFLAQGYEDVGQTSPITPFFQEIVQALLTVTHREDATESRLRASAYETLNEVVRCSTDETAPLVLQLVSVIMMELHKCLEAQNLSSDEREKQSELIGLLCGCLQVIIQKLGSSEPTKYVFSQYADQIMGLFIRVFACRNATAHEEAMLAIGALAYAIGPDFAKYLPEFYQFLEMDLQNFEEYQVCAVTVGVVGDICRALEDKILPYCDGIMTQLLRNLSSDNLHRSVKPPLFSCIGDIALAIGDNFNKYLMYAMNTLQIAAETYAHTSAFDLEMTDYINSLRNGILEAYSGIFQGFKNSSKTQLLIPYAPHILQFLDSIYMEKDMDDVVMKTAIGVLGDLADTLGSNAGSLIQQSLSSRDFLNECLTSDDHMIKESAEWAKLAINRAISV* 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1768 835 Pfam HEAT-like repeat 345 401 - -
Psa5g1768 835 SMART IBN_N_2 23 121 IPR001494 GO:0006886|GO:0031267
Psa5g1768 835 PANTHER IMPORTIN SUBUNIT BETA-1 91 833 IPR027140 GO:0006913
Psa5g1768 835 PANTHER IMPORTIN SUBUNIT BETA-1 3 92 IPR027140 GO:0006913
Psa5g1768 835 SUPERFAMILY ARM repeat 3 825 IPR016024 -
Psa5g1768 835 Gene3D - 1 835 IPR011989 -
Psa5g1768 835 PANTHER IMPORTIN BETA 91 833 IPR040122 GO:0006606
Psa5g1768 835 PANTHER IMPORTIN BETA 3 92 IPR040122 GO:0006606
Psa5g1768 835 Pfam Importin-beta N-terminal domain 23 76 IPR001494 GO:0006886|GO:0031267
Psa5g1768 835 ProSiteProfiles Importin-beta N-terminal domain profile. 23 121 IPR001494 GO:0006886|GO:0031267
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1768 Psa-Chr5 137487344 137490041 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1768 K14293 - gmx:100785130 1461.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g1768 5 137487344 137490041 Psa5g1768 5 137487344 137490041 ECH