Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1754 ATGTCTTCAACTTCAAGGTTTGGCATTGAGTCAAAAAAGAGTGTCACAGAGATGAATGAGGATGAAGAGTGTCCTGTTAAACAAGTTGAGCTTACAGTATCAAAAACTGATGACCCTACATTACCTGTTGTCACATTCAGAATGTGGGTTCTTGGGATTCTTTCATGTGTGGTTCTGTCCTTTGTGAACCAATTCTTTTGGTACAGAACACAGCCTTTGAGTGTCACTTCAATTTCTGCTCAGATTGCTGTTGTTCCACTTGGTCATTTCATGGCAAGAGTGTTGCCAACTCGTGTCTTCTTCAAAGATACATGGTTTGAATTCTCTATGAATAGAGGTCCATTCAATATCAAGGAACATGTTCTCATTACCATCTTTGCTAATTCTGGTGCTGGATCCGTTTATGCTACTCATATTTTGAGTGCAGTGAAGCTTATGTATAAAAGGAAACTCAGTTTCCTTCCAGCCTTACTACTCATGCTCACCACTCAGGTGCTGGGATTTGGTTGGGCAGGACTGTTTAGGAAATTTCTTGTGGAGCCTGCGGAAATGTGGTGGCCTTCTAATCTGGTCCAGGTCTCATTATTCAGTGCTCTGCATGAGAAAAGCAAAAGACCGAAAGGAGCCACAACCCGGACTCAGTTTTTCCTCCTTGTTATGATCTCTGGAATGGCATACTATGTGTTACCAGGCTACATGTTTTCAATGTTGACATCTTTTGCTTGGATGTGTTGGATTGGTCCCAAGTCTATCCTTGTCCAACAACTTGGTTCTGGTATGAAAGGTCTTGGGATTGCTGCATTTGGTTTTGATTGGTCTACGATTTCTTCTTACCTTGGCAGTCCACTAGCCAGCCCATGGTTTGCTACCGCAAATATCGCTGTTGGATTCGTTATCATTATGTATGTGATGACACCAATTTTTTACTGGTTCAATGTCTACGACGCCAAGAATTTTCCTATATTTTCAAATAAGCTTTTTATGGGAAATGGTTCGATCTATGACATTTCGACCATTGTCAATTCTGATTTCCATCTTGATCGGGATGCTTATGCAAAGAATGGGCCTCTACATCTCAGCACATTCTTTGCAATGACTTATGGTCTTGGATTTGCCACACTTTCTGCTACAATTGTGCATGTTCTTCTCTTCCATGGAAGGGAAATATGGGCGCAAAGTAAAAGTGCTTTTGGAGCCGGTAAAAAAACTGACATACACTCGAGACTTATGAGGAAGTACAAGTCAGTCCCCATGTGGTGGTTTCACATGATTCTAGTGGTGAACATAGCTCTTATTGTTTTTATTTGCGAGTACTACAACGAATCACTTCAATTGCCTTGGTGGGGCGTATTGCTAGCTTGTGCTATTTCCATTTTATTCACTCTTCCAATCGGCATAATAACAGCCACTACAAATCAGCAACCAGGCTTAAACATTATAACAGAATACATCATTGGTTACATGTATCCGGAGCGCCCTGTGGCTAACATGTGCTTTAAGGTGTATGGCTACATTAGCATGTCTCAGGCACTCACATTTTTGGCAGACTTTAAACTTGGTCATTATATGAAGATTCCACCAAGAACAATGTTCATGGCTCAGATGGTAGGAACATTCATATCAGTACTTGTGTACACAGTAACTGCTTGGTGGTTGATGGGGACGATCCCTGACCTTTGTGATACTTCCAAACTACCATCTGATAGCCCTTGGACTTGCCCAATGGACAATGTCTTCTATGATGCGTCAGTTATATGGGGACTTCTTGGACCACGCAGAATCTTCGGAAACCTCGGCGAATACAGCAATGTGAATTGGTTCTTCCTTGGTGGAGCCATTGCACCTTTTCTAGTTTGGCTTGCTCACAAGGCATTCCCAGGACAAACATGGATTCGTCTAATTCACATGCCTGTCTTGTTGGGTTCAACATCAATGATGCCTCCTGCAACTGCAGTCAACTTCACAAGCTGGATTGCCGTCGGCTTTATCTCAGGGTACATTATATATAGATACAAACAAGATTGGTGGAAGCGCTACAATTATGTTTTGTCTGGCGGTCTTGACGCCGGAACCGCCTTCATGACAATCTTACTTTTTCTTACTTTGGGTTCAAACAACATTAACCTTAACTGGTGGGGAAATAATGTTGAAGGGTGTCCCTTGGCTGCTTGTCCTACTGCAAAAGGCATTATAGTTAAAGGCTGTCCAGTTCTTTGA 2217 0.4213 MSSTSRFGIESKKSVTEMNEDEECPVKQVELTVSKTDDPTLPVVTFRMWVLGILSCVVLSFVNQFFWYRTQPLSVTSISAQIAVVPLGHFMARVLPTRVFFKDTWFEFSMNRGPFNIKEHVLITIFANSGAGSVYATHILSAVKLMYKRKLSFLPALLLMLTTQVLGFGWAGLFRKFLVEPAEMWWPSNLVQVSLFSALHEKSKRPKGATTRTQFFLLVMISGMAYYVLPGYMFSMLTSFAWMCWIGPKSILVQQLGSGMKGLGIAAFGFDWSTISSYLGSPLASPWFATANIAVGFVIIMYVMTPIFYWFNVYDAKNFPIFSNKLFMGNGSIYDISTIVNSDFHLDRDAYAKNGPLHLSTFFAMTYGLGFATLSATIVHVLLFHGREIWAQSKSAFGAGKKTDIHSRLMRKYKSVPMWWFHMILVVNIALIVFICEYYNESLQLPWWGVLLACAISILFTLPIGIITATTNQQPGLNIITEYIIGYMYPERPVANMCFKVYGYISMSQALTFLADFKLGHYMKIPPRTMFMAQMVGTFISVLVYTVTAWWLMGTIPDLCDTSKLPSDSPWTCPMDNVFYDASVIWGLLGPRRIFGNLGEYSNVNWFFLGGAIAPFLVWLAHKAFPGQTWIRLIHMPVLLGSTSMMPPATAVNFTSWIAVGFISGYIIYRYKQDWWKRYNYVLSGGLDAGTAFMTILLFLTLGSNNINLNWWGNNVEGCPLAACPTAKGIIVKGCPVL* 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1754 738 PANTHER ISP4 LIKE PROTEIN 12 737 IPR004648 GO:0055085
Psa5g1754 738 Pfam OPT oligopeptide transporter protein 44 700 IPR004813 GO:0035673
Psa5g1754 738 PANTHER OLIGOPEPTIDE TRANSPORTER 6 12 737 - -
Psa5g1754 738 TIGRFAM OPT_sfam: oligopeptide transporter, OPT superfamily 29 702 IPR004813 GO:0035673
Psa5g1754 738 TIGRFAM ISP4_OPT: small oligopeptide transporter, OPT family 22 708 IPR004648 GO:0055085
Psa5g1754 738 MobiDBLite consensus disorder prediction 1 21 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1754 Psa-Chr5 135983349 135987402 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g1754 19 737 Organic Solute Cotransporters AT4G27730 71.468 0.0 1114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1754 - - gmx:100817739 1311.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g1754 5 135983349 135987402 Psa5g1754 5 135983349 135987402 ECH