Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1727 ATGGCACTCTCAGCCTCTTGCTGCATTGTTGCTTCATCAAACATTAACCCCTTACCATCTTTTCCATTCAAACTCCCTTCCTTATGGCCATCCACACAAAAGGTGAAGATGGGGCCTCTCAGTGTTTCTCCAATGGGTTTTGGAACATGGGCATGGGGGAATCAGATTCTATGGGGGTATAAGGAATCTATGGATGATGACCTTCAACAAGTCTTCAACATGGCTGTTGACAATGGTGTTAATCTTTTTGATACTGCTGATTCTTATGGGACTGGAAGGTTTAATGGCCAGAGTGAGAAACTCCTTGGGAAGTTCATTCGAGATTTTCGAGAGAAAAAGGGGAGCAGGAGTGAAATTGTGATTGCTACAAAATTTGCTGCTTATCCATGGCGCCTTACACCAGGGCAGTTTGTGAATGCTTGCAGGGCATCACTAGATAGGATGCAGATTGAGCAAATTGGGATAGGACAACTACATTGGTCAACTGCAAACTATGCTCCTTTCCAGGAATTAGCACTTTGGGATGGTTTAGTGGCAATGTATGACAAGGGTTTAGTTCAAGCTGTTGGGGTTAGTAATTATGGACCGAAGCAGCTTTTAAAGATACATGCTTACTTAAAAGAACGTGGAGTTCCCTTATGCTCAGCCCAGGTGCAATTTTCTTTGCTAAGCATGGGGGAAGAACAACTAGAGATCAAGAGTATATGTGATTCTCTGGGTATTCGGGTAATTGCTTATAGTCCTCTGGGACTTGGAATGCTTACTGGGAAATACTCGTCATCCAAACTTCCAACTGGGCCAAGGGGATTGCTATTTAAGCAAATACTTCCAGGTCTGGATCCTTTATTGAGTTCCTTGAGAGAAATTGCAAATAAAAGACGCAAAACCATGTCACAGGTTGCAATAAATTGGTGTATAAGCAAAGGCACAATTCCTATTCCTGGAGTGAAGTCAATAACACAGGCAGAGGAAAACTTGGGTGCTCTGGATTGGCGCCTCTCCTCAGACGAGATACTTCAGTTGGAGTATGCAGCACAGGAATCACCTCGTAGGATGATCCAAAACATTTTCCAAACCAGATAA 1083 0.4321 MALSASCCIVASSNINPLPSFPFKLPSLWPSTQKVKMGPLSVSPMGFGTWAWGNQILWGYKESMDDDLQQVFNMAVDNGVNLFDTADSYGTGRFNGQSEKLLGKFIRDFREKKGSRSEIVIATKFAAYPWRLTPGQFVNACRASLDRMQIEQIGIGQLHWSTANYAPFQELALWDGLVAMYDKGLVQAVGVSNYGPKQLLKIHAYLKERGVPLCSAQVQFSLLSMGEEQLEIKSICDSLGIRVIAYSPLGLGMLTGKYSSSKLPTGPRGLLFKQILPGLDPLLSSLREIANKRRKTMSQVAINWCISKGTIPIPGVKSITQAEENLGALDWRLSSDEILQLEYAAQESPRRMIQNIFQTR* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1727 360 SUPERFAMILY NAD(P)-linked oxidoreductase 40 346 IPR036812 -
Psa5g1727 360 CDD AKR_AtPLR-like 42 342 - -
Psa5g1727 360 PRINTS Aldo-keto reductase signature 75 99 IPR020471 GO:0016491
Psa5g1727 360 PRINTS Aldo-keto reductase signature 177 194 IPR020471 GO:0016491
Psa5g1727 360 Pfam Aldo/keto reductase family 44 342 IPR023210 -
Psa5g1727 360 Gene3D - 33 350 IPR036812 -
Psa5g1727 360 PANTHER AFLATOXIN B1 ALDEHYDE REDUCTASE 26 353 - -
Psa5g1727 360 ProSitePatterns Aldo/keto reductase family signature 2. 177 194 IPR018170 GO:0016491
Psa5g1727 360 PANTHER PYRIDOXAL REDUCTASE, CHLOROPLASTIC 26 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1727 Psa-Chr5 134266583 134270431 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1727 K05275 - mtr:MTR_3g092140 662.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g1727 5 134266583 134270431 Psa5g1727 5 134266583 134270431 ECH