Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1710 ATGGCTCAGGCACTGTCATTGTCAACAATTGCTTCACCTATTCTATCCCAAAAACCAGGCAACTCTCTCAAAAATGCACCACCTTGCATGACGTCATTTCCGTTAAAGAGGCAATTGCCGAGGCTTGGACTGAGAAATGTGAGAGCTCAGGCTGGTGGTGATGGTGATAACAAAGATAACTCGGTGGAAGTTCATCGTGTTAACAAAGACGATCAAGGAACTGCTGTAGAAAGAAAGCCTCGCAGAAGTTCCATCGATATTTCACCATTTGAAAGAAAGCCTCGCAGAAGTTCCATCGATATTTCACCATTTGGTTTATTGGACCCATGGTCACCTATGAGAAGCATGCGTCAGATGCTGGACACAATGGACAGAATTTTCGAAGATGCAATCACAATTCCTGGAAGAAACATTGGAGGAGGTGAGATTCGTGTCCCTTGGGACATCAAAGATGAAGAACATGAAATCAGAATGCGTTTTGATATGCCTGGTGTTTCTAAGGAAGACGTTAAAGTGTCAGTTGAAGATGATGTTCTTGTCATAAAAAGTGATCATAGAGAGGAAAATGGTGGAGAAGATAGTTGGTCAAGAAAGAGTTATAGTTGTTATGATACTCGTCTCAAGCTTCCTGATAACTGTGAGAAAGAGAAGGTTAAAGCTGAGTTGAAAGATGGTGTGCTTTATATTACTATTCCTAAGACTAAAATTGAACGCACGGTTATTGATGTTCAAATTCAGTGA 741 0.4103 MAQALSLSTIASPILSQKPGNSLKNAPPCMTSFPLKRQLPRLGLRNVRAQAGGDGDNKDNSVEVHRVNKDDQGTAVERKPRRSSIDISPFERKPRRSSIDISPFGLLDPWSPMRSMRQMLDTMDRIFEDAITIPGRNIGGGEIRVPWDIKDEEHEIRMRFDMPGVSKEDVKVSVEDDVLVIKSDHREENGGEDSWSRKSYSCYDTRLKLPDNCEKEKVKAELKDGVLYITIPKTKIERTVIDVQIQ* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1710 246 Gene3D - 106 245 IPR008978 -
Psa5g1710 246 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 138 246 IPR002068 -
Psa5g1710 246 PANTHER 26.5 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 1 246 IPR044587 GO:0009408
Psa5g1710 246 MobiDBLite consensus disorder prediction 50 94 - -
Psa5g1710 246 Pfam Hsp20/alpha crystallin family 148 246 IPR002068 -
Psa5g1710 246 PANTHER HEAT SHOCK PROTEIN 21, CHLOROPLASTIC 1 246 - -
Psa5g1710 246 SUPERFAMILY HSP20-like chaperones 126 238 IPR008978 -
Psa5g1710 246 CDD ACD_sHsps-like 148 233 - -
Psa5g1710 246 MobiDBLite consensus disorder prediction 58 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1710 Psa-Chr5 132894463 132895282 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1710 K13993 - gmx:548078 320.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g1710 5 132894463 132895282 Psa5g1710 5 132894463 132895282 ECH