Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1681 ATGTCTGTAATCACAATACAATCTCCAAAACATTGTGCAACTAAACAAGTATTCAAAATAGAGCGAAACTACAAGAAAATCTTCTTCGCTTTCTCAACATTTTTCACCACAATCCTCTTACTCATACTTCTCATCTACTTCATCCTCAAACCTTCAAAACCTCAATTCTCTCTTCAAGAACTCGACATCTATCAACTCAACCTCACAGGACCAATCCTCAACTCATCAATCCAACTCACTCTCCTCTCAAAAAATCCAAACCAAAAAGTTAGCATTTACTACGACGAGTTTCAAGTTTACGCAACTTACAAGAATCAGCAAATAACTAGTGATTCATTTGTGCCACCCTTTTACCAAGGACAACAAGAGAGTAACCTTCTGTCATCTTCTTTGATAGGAAATGGTTTACCTGTTGCTCCTTCCATTGGTTATCAAATGGGCCATGATCAAGTTTCTGGAAGATTGGTTTTGATTCTTAAAGTTAATGGAAAACTTCGTTGGAAAATTGGAACTTGGGTTTCTGGTCGTTACAGGTTTAACGTTAACTGTGTTTCTGTTGTGGCTTTTGGAATTGGAACCTCTATGAATGTCCCTCCTATGACTTCTCAGTGTTCTACCATTATATAA 627 0.3716 MSVITIQSPKHCATKQVFKIERNYKKIFFAFSTFFTTILLLILLIYFILKPSKPQFSLQELDIYQLNLTGPILNSSIQLTLLSKNPNQKVSIYYDEFQVYATYKNQQITSDSFVPPFYQGQQESNLLSSSLIGNGLPVAPSIGYQMGHDQVSGRLVLILKVNGKLRWKIGTWVSGRYRFNVNCVSVVAFGIGTSMNVPPMTSQCSTII* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1681 208 PANTHER OS05G0367900 PROTEIN 23 206 IPR044839 GO:0098542
Psa5g1681 208 Pfam Late embryogenesis abundant protein 80 183 IPR004864 -
Psa5g1681 208 PANTHER NDR1/HIN1-LIKE PROTEIN 26 23 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1681 Psa-Chr5 131097269 131098967 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g1681 27 183 EF-hand Containing Proteins AT5G21130 19.876 7.60e-06 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1681 - - gmx:100783857 280.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g1681 5 131097269 131098967 Psa5g1681 5 131097269 131098967 ECH