Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1675 ATGGACACTAAGGTTCTTTCTTCCGGAATCCGTTATTCAAAATTACCGGAAAGTTACATACGACCCGAATCCGACAGACCATGTCTCTCCGAAGTCTCTGAGTTCCAGAATGTTCCTATCATCGACTTGGGTTCTCAAAATAGAAACCAGATTGTTCAGCAAATCGGTGAAGCATGTAGCTCCTATGGCTTCTTCCAGGTGATTAATCATGGGGTGGGTCTAGAAGCATTGAAAAGAACGACAGAAGTGGCGTATGAATTTTTCAACTTGCCAGTTGAGGAGAAGATGAAATTGTATTCAGACGATCCTTCAAAGACAATGAGATTATCAACTAGTTTTAATGTGACGAAAGAGGAGGTTCATAATTGGAGAGATTATCTTAGACTTCATTGCTATCCTTTGGAGAAATATGTGTCTGAGTGGCCTTCTAATCCTGTTTCATTCAAAGAAACCGTGGCAAATTATTGCAAGGAAGTTAGGGAATTGGGGTTTAGAATAGAAGAATACATATCAGAGAGTTTGGGCCTAGAAAAAAACTACTTAAGGAATGTTTTGGGGGAACAAGGACAACACATGGCAGTGAATTACTATCCACCATGCCCACAACCAGAACTTACATATGGATTGCCAGGCCATACCGATCCAAATGCTCTTACAATTCTACTTCAAGACCTTCATGTTGCCGGCCTCCAAGTTCTTAAAGACGGTAAATGGCTCGCTGTTAATCCTCACCCTGACGCCTTTGTTATTAACATAGGTGATCAACTTCAGGCTTTAAGTAATGGACTTTATAAGAGTGTTTGGCACAGGGCTATTGTGAATGCTGAGAAACCAAGGCTTTCAGTAGCTTCATTTCTCTGCCCAGATAATGAGGCATTGATATATCCTGCAAAGTCACTCACAGAAAATGGATCTGGAGCCATATACAGAGAATTTACATATGCAGAATACTACAGCAAATTCTGGAGTAGGAATTTGGACCAAAAACATTGTTTGGAACTTTTTAAGAACTAG 1014 0.4034 MDTKVLSSGIRYSKLPESYIRPESDRPCLSEVSEFQNVPIIDLGSQNRNQIVQQIGEACSSYGFFQVINHGVGLEALKRTTEVAYEFFNLPVEEKMKLYSDDPSKTMRLSTSFNVTKEEVHNWRDYLRLHCYPLEKYVSEWPSNPVSFKETVANYCKEVRELGFRIEEYISESLGLEKNYLRNVLGEQGQHMAVNYYPPCPQPELTYGLPGHTDPNALTILLQDLHVAGLQVLKDGKWLAVNPHPDAFVINIGDQLQALSNGLYKSVWHRAIVNAEKPRLSVASFLCPDNEALIYPAKSLTENGSGAIYREFTYAEYYSKFWSRNLDQKHCLELFKN* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1675 337 SUPERFAMILY Clavaminate synthase-like 11 328 - -
Psa5g1675 337 Pfam 2OG-Fe(II) oxygenase superfamily 190 288 IPR044861 -
Psa5g1675 337 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 188 288 IPR005123 -
Psa5g1675 337 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 1 336 - -
Psa5g1675 337 Pfam non-haem dioxygenase in morphine synthesis N-terminal 38 143 IPR026992 -
Psa5g1675 337 Gene3D - 3 319 IPR027443 -
Psa5g1675 337 PANTHER PROTEIN DOWNY MILDEW RESISTANCE 6 1 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1675 Psa-Chr5 130603571 130606363 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g1675 11 336 Glycosyltransferase AT5G59530 33.234 9.01e-52 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1675 K24028 - gmx:100782253 585.874
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g1675 5 130603571 130606363 Psa5g1675 5 130603571 130606363 ECH