Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1667 ATGGCTCCCGGTCCAGTTATTGACGCAGTCACCGAGCCCGAACTCGACCAACAAATTCCCCTTCTTGACGAAACTACCCTCAAGAAGAAACCCCAACCCGAGGAGGACGATGCTCCCATTGTTGAGGACGTCAAGGAGGATGACAAAGATGAAGACGATGATGAAGATGATGATGACGACGACGAGGACGATGATGACAAGGAAGATGGCGCTCAAGGTGGTGCTGAGGGTTCAAAGCAAAGCAGAAGCGAGAAGAAGAGTCGAAAAGCAATGCTGAAGCTCGGACTGAAACCTGTTACTGGCGTTAGTCGGGTCACAATCAAGAGAACCAAAAATATTCTTTTTTTCATCTCAAAACCCGATGTATTCAAGAGTCCAAATTCTGAGACCTACATTATATTCGGGGAAGCAAAAATAGAAGACCTGAGCTCTCAGTTGCAAACTCAAGCTGCTCAGCAGTTTAAGATGCCAGATATGGGATCTGTAATGGCAAAACAAGATCAAGGTGCAATAGCTGGTGCACAGCCTGAGGAGGAAGAAGAGGAGGTCGATGAAACTGGCGTGGAGCCCCATGACATTGATTTGGTCATGACACAAGCAGGAGTTTCCCGGACCAAGGCCGTCAAGGCTCTCAAGACTCACAATGGAGACATTGTTGGTGCCATTATGGAGCTCACTACTTAA 684 0.4766 MAPGPVIDAVTEPELDQQIPLLDETTLKKKPQPEEDDAPIVEDVKEDDKDEDDDEDDDDDDEDDDDKEDGAQGGAEGSKQSRSEKKSRKAMLKLGLKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYIIFGEAKIEDLSSQLQTQAAQQFKMPDMGSVMAKQDQGAIAGAQPEEEEEEVDETGVEPHDIDLVMTQAGVSRTKAVKALKTHNGDIVGAIMELTT* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1667 227 MobiDBLite consensus disorder prediction 167 187 - -
Psa5g1667 227 SMART NAC_2 84 140 IPR002715 -
Psa5g1667 227 Gene3D - 90 143 IPR038187 -
Psa5g1667 227 MobiDBLite consensus disorder prediction 1 90 - -
Psa5g1667 227 Pfam NAC domain 84 139 IPR002715 -
Psa5g1667 227 ProSiteProfiles NAC A/B domain profile. 81 146 IPR002715 -
Psa5g1667 227 Pfam HYPK UBA domain 187 226 IPR044034 -
Psa5g1667 227 MobiDBLite consensus disorder prediction 39 70 - -
Psa5g1667 227 PANTHER NASCENT POLYPEPTIDE ASSOCIATED COMPLEX ALPHA SUBUNIT-RELATED 26 226 IPR016641 GO:0005854
Psa5g1667 227 PANTHER NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 2 26 226 - -
Psa5g1667 227 CDD UBA_NAC_euk 190 226 - -
Psa5g1667 227 Gene3D - 188 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1667 Psa-Chr5 130378267 130381241 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1667 K03626 - gmx:100499943 313.153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g1667 5 130378267 130381241 Psa5g1667 5 130378267 130381241 ECH