Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1659 ATGGCAGCGATTCATGTTCTTGTTGTGTTTCTTTCATGCATTTCAACTGTGGTGAGGTGTGAGGATGACGATGATGACGCGTATGCTGAAGAGATTCTAAGTTCAGCCCAAAGGGAAAAAGATTGGTTGGTTTCAGTGAGAAGGAAGATTCATCAACACCCAGAATTGGCTTTCCAAGAACACAACACAAGTGCTCTAATCCGCAGTGAACTTGACAAACTTGGTATACCTTATACATACCCAGTTGCCAAAACTGGTGTAGTTGCACAAATTGGTTCCGGTTCTCCTCCCATCATCGCTATTCGTGCTGATATAGATGCACTCCCCTTGCAGGAGCTTGTTGAGTGGGAATACAAGAGCAAAATCAATGGCAGAATGCATGCTTGTGGACATGATGCTCATGCTACTATGCTACTTGGGGCTGCAAAGTTGCTTAATCAGCGCAAAGATAAGCTAAAGGGAACTGTGAGGCTTCTTTTCCAACCTGCAGAGGAGGGAGCTAAAGGTGCCTCACAAATGATAAAAGAAGGGGTTCTTCAAGATGTTGAAGCAATTTTCGCTCTTCATATTGATGCTATGACATCTACCGGAGCCATAGCATCGATTCCAGGTCCTTTTACAGCTGCTGGATGTATCTTTGAAGCAAAAATTGTAGGAGTAGGTGGTCACGCTGCATTCCCGCACATGACTGTAGATCCAGTGCTGGCTACATCATTTGCAATATTGGCCTTGCAACAGCTTGTCTCAAGGGAAATTGATCCTCTTCACAGTCAAGTGCTGTCGATTACTTATGTCAAAGGAGAGAATGCGTTAAACGTGATCCCACCTTATGTAAAGTTTGGAGGTACTCTAAGGAGCCAGACAACTGAAAGCATGTACCACTTCAGACAGAGATTAAAAGAGGTTATTGAAGGACAAGCAAGTGTTCATCGATGTAAAGCATATGTTGATTTCATGGAAAAAGACCACAGACCATATCCTGCTGTTGTCAACGACAAAGATTTACATCTACATGTCGATAGAGTTGGTCGGCTTCTGCTTGGTCCAGACAATGTCCATGAAGCAAAGAAGTTAATGGCAGGTGAAGATTTTGCGTTTTATCAAGAAGTGATTCCTGGAACATTGTTTTCCATTGGAATCAGAAATGAGAAAGTAGGATCCGTTCACTCCCCACACTCTCCGTTTTTCTTTCTTGATGAGGAAGTTCTTTCAATCGGAGCTGCTCTTCACACTGCTGTCGCTGAATTGTATTTAAGAGAGCATAGTATTTAG 1272 0.43 MAAIHVLVVFLSCISTVVRCEDDDDDAYAEEILSSAQREKDWLVSVRRKIHQHPELAFQEHNTSALIRSELDKLGIPYTYPVAKTGVVAQIGSGSPPIIAIRADIDALPLQELVEWEYKSKINGRMHACGHDAHATMLLGAAKLLNQRKDKLKGTVRLLFQPAEEGAKGASQMIKEGVLQDVEAIFALHIDAMTSTGAIASIPGPFTAAGCIFEAKIVGVGGHAAFPHMTVDPVLATSFAILALQQLVSREIDPLHSQVLSITYVKGENALNVIPPYVKFGGTLRSQTTESMYHFRQRLKEVIEGQASVHRCKAYVDFMEKDHRPYPAVVNDKDLHLHVDRVGRLLLGPDNVHEAKKLMAGEDFAFYQEVIPGTLFSIGIRNEKVGSVHSPHSPFFFLDEEVLSIGAALHTAVAELYLREHSI* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1659 423 CDD M20_IAA_Hyd 43 418 IPR044757 GO:0009850|GO:0016787
Psa5g1659 423 PANTHER IAA-AMINO ACID HYDROLASE ILR1-LIKE 3 7 422 - -
Psa5g1659 423 Gene3D Zn peptidases 44 403 - -
Psa5g1659 423 PIRSF Amidohydrol_AmhX 28 422 IPR017439 GO:0016787
Psa5g1659 423 TIGRFAM amidohydrolases: amidohydrolase 43 406 IPR017439 GO:0016787
Psa5g1659 423 Pfam Peptidase dimerisation domain 213 306 IPR011650 -
Psa5g1659 423 SUPERFAMILY Bacterial exopeptidase dimerisation domain 208 325 IPR036264 -
Psa5g1659 423 PANTHER PEPTIDASE M20 FAMILY MEMBER 7 422 IPR017439 GO:0016787
Psa5g1659 423 Gene3D - 208 326 - -
Psa5g1659 423 SUPERFAMILY Zn-dependent exopeptidases 30 419 - -
Psa5g1659 423 Pfam Peptidase family M20/M25/M40 100 413 IPR002933 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1659 Psa-Chr5 129988746 129992699 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1659 K14664 - gmx:100777587 666.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g1659 5 129988746 129992699 Psa5g1659 5 129988746 129992699 ECH