Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1588 ATGCTGTTGACTATCGCTTTTTCTTCGCATTTTCCTGCTTTTTTTCCTCAAATTCCGCAATACCGCTTTCGGTGTCAATGCTGTAGTTTAGTTCCCGGAAATGGTTTTCAAACGGAACGTGGTTTGGAGTTTGATACCGGGGGCGCATTTTACCGGCGAGAGAGTGCTACTGGAAGAGACCTCGGTGTACTTGCTGCTTCGTTACAGAAGAAGGTTAGTGGAAGCTTGCGTGTTCTTGATGCTCTTTGTGGTTGCGGGATTCGGTCGCTGCGGTACTTGAAGGAAGCTGAAGCGGATTTTGTTGTTGCTAATGATGGAAATGAGTGCTATGGGAGTACCATTGTGAAGAATTTGTCTAGAGTTTGTGTGAAAGAGGAGAAAAGATGGGTGGTTACTCATTTAGAAGCTAATAGAGTTATGACTGATTATTATCTTCAGAAGAGTTTTTTTGATTTTATTGATGTTGATTCTTTTGGAAGTGATTCTTCTTTCTTGAGGTCTGCTATCAATAGTTTGAAATTTGGTGGTTTGCTTTATGTCACTTCAACTGATGGTTTCTCTTCTGCTGGCCACCGTCCACATCATTCTTTAGCTGCTTATGGAGCCTATGTGCGTCATACGCCGTATTCGAACGAGATTGGTTTGCGAATGCTTATAGGCGGGGTTGTTCGGGAGGCTTCTGTGTTGGGGTACCATGTAACTCCGTTGTTTTCGTACTATGCTTATCATGGACCCGTTTTCCGAGTCTTGCTCAGGTTGAATCGTGGGAAGGTTCATGATAGTAGGCATTATGGTTTTATTGGCCATTGCCATCAGTGTGGAAATTGCAATGAATTTTCTTGGGACCAACTTGGTCAGTTCAGTTGCTCCTGCAGTGTGTCAAAGGTTTCAAACTCCCTTAAGGTATCAGGACCTCTTTGGACAGGGCCTCTTCATGATGCGGCGTATCTTACAGACATGTTAGATCTGGCCAAGGAGTGGGGATGGATTGGTTGTGATGGTAAAGACAGTCTTGAAAAGCTTATAAAATTGATGGTGGATGAAAGTGACCCCAGGTTGCCATCTGGGTATATAAAGTTGGATGAGATGGCAAGCCGTGCAAAAATCAATATTCCGCCTTTGAGGACCTTGATGAGCGCCATGCACAAGAAAGGTTATGCTGTCAGCAGGTCTCATATAACCACAAAGGCAATTAAAACAAATTGCCCCATGACAGAATTCATTAGTATAGCCAAAGAACTACTGCCGGTATCTGTCTCTTAA 1263 0.4355 MLLTIAFSSHFPAFFPQIPQYRFRCQCCSLVPGNGFQTERGLEFDTGGAFYRRESATGRDLGVLAASLQKKVSGSLRVLDALCGCGIRSLRYLKEAEADFVVANDGNECYGSTIVKNLSRVCVKEEKRWVVTHLEANRVMTDYYLQKSFFDFIDVDSFGSDSSFLRSAINSLKFGGLLYVTSTDGFSSAGHRPHHSLAAYGAYVRHTPYSNEIGLRMLIGGVVREASVLGYHVTPLFSYYAYHGPVFRVLLRLNRGKVHDSRHYGFIGHCHQCGNCNEFSWDQLGQFSCSCSVSKVSNSLKVSGPLWTGPLHDAAYLTDMLDLAKEWGWIGCDGKDSLEKLIKLMVDESDPRLPSGYIKLDEMASRAKINIPPLRTLMSAMHKKGYAVSRSHITTKAIKTNCPMTEFISIAKELLPVSVS* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1588 420 Gene3D Vaccinia Virus protein VP39 32 350 IPR029063 -
Psa5g1588 420 PANTHER TRNA (GUANINE(26)-N(2))-DIMETHYLTRANSFERASE 35 414 - -
Psa5g1588 420 ProSiteProfiles Trm1 methyltransferase domain profile. 35 411 IPR002905 GO:0003723|GO:0004809|GO:0008033
Psa5g1588 420 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 38 412 IPR029063 -
Psa5g1588 420 Pfam N2,N2-dimethylguanosine tRNA methyltransferase 49 410 IPR002905 GO:0003723|GO:0004809|GO:0008033
Psa5g1588 420 PANTHER N 2 ,N 2 -DIMETHYLGUANOSINE TRNA METHYLTRANSFERASE 35 414 IPR002905 GO:0003723|GO:0004809|GO:0008033
Psa5g1588 420 Gene3D - 356 414 IPR042296 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1588 K00555 - gmx:100788340 647.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g1588 5 125023960 125027363 Psa5g1588 5 125023960 125027363 ECH