Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1587 ATGGATACTGTACAAGAAAGTTTGTTATTGTCCTTCTCGCCTAACCAACCGCAGTTACCAATTGATGAGGAGCTTTGGTTGATGGCTGAAGAGAGGGCCCAGGAAATACTGTGTACAATTCAGCCTAATGTTGTTTCTGAGGTGAACAGAAAGCAGATCATTGATTTCGTTCAGAGGCTGATTGGAGGTTACTATGGGGGAGAGGTTTTCGTGTTTGGATCAGTCCCACTGAAAACCTACCTTCCAGATGGAGATATTGACTTGACAGTTCTCAGTCAAGAAAGTGTAGAGGAGGATTTAGCGCAAGCAGTATGCAATCTACTTGGAAGTGGAGAAGACCTCGAATATGAAGTGAAAGACATTCAGCATATACGTGCTCAGGTAAAGGTTGTAAAATGCACAGTGAAAGGTATAGCGGTTGACATCTCTTTCAACCAGATGGCTGGACTCTATGCTCTGCGCTTTTTGGAAGAGGTGCTATACAGATTTTTGGACTACTACAGCACATTTGATTGGGAGAAAAACTATATCACCATAGAAGGTCCACAACCATTATCCTCCCTTCCAGAAATTGTTGAGAAACCAGAATCTGATCGAGGTGGGTTGCTTCTCAGTAAAGAGCTTCTGAAAAATTACAGGGAGATGTGCTCTGTTCCAAAGGCATGCGAGACTACACCCCGTGAATTTCCCATCAAGTGCATGAACATTTTGGATCCTCTAAAAAGCGACAACAACCTAGGCCGCAGTGTCAACAAAAGCACTTTACATCGAATTGGTTACGCTTTTGCCTTCGGTGCTGAAAAGCTTAAGGAGATTCTTGATCTTCCAGGAGAAAGCATGGGTGGAGCACTTGAGGTGTTTTTCATGAACACCTTGAATAGAAATGGGAAAGGACAAAGGCCAGATATCGATGTTCCTGTTCCTGCATTTGGTACTGGAAAATCTGAAGAGCCTGTCCTTGTTGGAGATTGTGACAGTTTCTATGGTGGCTTAAAACATGTTCAGATGTATCGTAACTATGCTGTGCCGCTTGCACCTTCAATTTCCCCACCGATACCATTTGATGCTGACATGCTTAAGCTACAACAAAACTGGCTTAGGTATTATCATAGAGGTACTGATGTATACGTCCCTAGACAGACATTCTTTCATCCAAATGCTCCTCCGCATCCAAGTTATAGCCTTGATGAAACAGGGAAATCGCGAGGAACAGGCACATACATACCTGACATGACTCTTACTACCTACTGGAATACCCGTGCAAGAGGGTCCAGACCAAGGAAATTCGGTACTGGAAATAATAACAATAATAGTAATGCTAATGCATTGCCCAAACCATTGGAGAGAAAGGAAATAGAAGAAGTTCCTTCTGAGACTGACATGAATGATAATAGCTCCAAGTCCTTTGAGCTCTCAAATGAAGATTTTCCTCTTCTTTCAAGCATTGGCAACAGCACTTCGTCAGCATCCCAACAATCGGAGAGAAAGGAAATAGAAGAGGTTCCTTCTGAGACTGACATGAATGATAATAGCTCCAAGTCCTTTGAGCTCTCAAATGAAGATTTTCCTCTTCTTTCAAGCATTGGCAACCGCACTTCGTCGGCATCCCATCAATCCAAGCTGGACCATAATTCCTCATCGCCTCAAACGTTTATCGATTTTGGAACTTACAGTGCCTCGCAACCAGCGACAGAACTGAGTTTGGGAAAAAAGAGTCAGAAAGAGGATTCCAGCGCTACTACACCAGTTGTTCCAAGTCTGGCAGTGGAGACAAAAGAGAAATATGCTCGGATCGAAGAGAAGGCAGATTGA 1812 0.4332 MDTVQESLLLSFSPNQPQLPIDEELWLMAEERAQEILCTIQPNVVSEVNRKQIIDFVQRLIGGYYGGEVFVFGSVPLKTYLPDGDIDLTVLSQESVEEDLAQAVCNLLGSGEDLEYEVKDIQHIRAQVKVVKCTVKGIAVDISFNQMAGLYALRFLEEVLYRFLDYYSTFDWEKNYITIEGPQPLSSLPEIVEKPESDRGGLLLSKELLKNYREMCSVPKACETTPREFPIKCMNILDPLKSDNNLGRSVNKSTLHRIGYAFAFGAEKLKEILDLPGESMGGALEVFFMNTLNRNGKGQRPDIDVPVPAFGTGKSEEPVLVGDCDSFYGGLKHVQMYRNYAVPLAPSISPPIPFDADMLKLQQNWLRYYHRGTDVYVPRQTFFHPNAPPHPSYSLDETGKSRGTGTYIPDMTLTTYWNTRARGSRPRKFGTGNNNNNSNANALPKPLERKEIEEVPSETDMNDNSSKSFELSNEDFPLLSSIGNSTSSASQQSERKEIEEVPSETDMNDNSSKSFELSNEDFPLLSSIGNRTSSASHQSKLDHNSSSPQTFIDFGTYSASQPATELSLGKKSQKEDSSATTPVVPSLAVETKEKYARIEEKAD* 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1587 603 MobiDBLite consensus disorder prediction 428 443 - -
Psa5g1587 603 PANTHER NUCLEOTIDYLTRANSFERASE DOMAIN PROTEIN 158 491 - -
Psa5g1587 603 PANTHER NUCLEOTIDYLTRANSFERASE DOMAIN PROTEIN 492 587 - -
Psa5g1587 603 PANTHER NUCLEOTIDYLTRANSFERASE DOMAIN PROTEIN 1 159 - -
Psa5g1587 603 SUPERFAMILY PAP/OAS1 substrate-binding domain 156 275 - -
Psa5g1587 603 PANTHER PAP/OAS1 SUBSTRATE-BINDING DOMAIN SUPERFAMILY 492 587 - -
Psa5g1587 603 PANTHER PAP/OAS1 SUBSTRATE-BINDING DOMAIN SUPERFAMILY 158 491 - -
Psa5g1587 603 PANTHER PAP/OAS1 SUBSTRATE-BINDING DOMAIN SUPERFAMILY 1 159 - -
Psa5g1587 603 MobiDBLite consensus disorder prediction 484 585 - -
Psa5g1587 603 Gene3D - 156 276 - -
Psa5g1587 603 MobiDBLite consensus disorder prediction 505 585 - -
Psa5g1587 603 CDD NT_PAP_TUTase 49 158 - -
Psa5g1587 603 MobiDBLite consensus disorder prediction 419 449 - -
Psa5g1587 603 MobiDBLite consensus disorder prediction 387 407 - -
Psa5g1587 603 Gene3D Beta Polymerase, domain 2 46 155 IPR043519 -
Psa5g1587 603 Pfam Nucleotidyltransferase domain 51 132 IPR002934 GO:0016779
Psa5g1587 603 SUPERFAMILY Nucleotidyltransferase 15 157 IPR043519 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1587 Psa-Chr5 125016078 125022449 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1587 - - gmx:100787145 531.946