Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1569 ATGGCTACATCTTCTCTTCTACACTTACCCGAACTCCATTTTCTTTCTCCACAAATCCCTCACCGTAACCGTTTCTCTCTTTCTACATACTCCATTTCCCGCCTTTCTACCTCCAACGTTGCTCTTCGCACCACGCGAATCCGCGCATCGAAAGAAGAATCCGCGTTAGCCGAGCGAGTTAACGACGTGAAGTGGAGCGGAAACGGAGCTGCCTCCCGTGCCGGCGACAATAAAGCATCAGGAGGATACGTTAACGGCGCCGTCAAGAAAAGCCCGGGGGATTACGGATATAGAAACGGTGTAGCTGCTACAGAGGTGGTGGACGTTGAAGTCTCTAAGGTGAATGAGGATGGGAGGAAGAGAAGGTTGGAGGAGATTGGAAAAGAAGATGCGTGGTTTAAACAAACTGAGAAAGTAAAAGTTGAGGTAGCAGTTGCTCCTGGAGGTCGTTGGAGCAGATTCAAGACTTACTCTACAATCCAGAGAACCTTAGAGATTTGGGGATTTGTTGTAACGTTCATCTTTAAGGCATGGCTGGACAATCAGAAGTTTTCTTACAAAGGAGGAATGACCGAGGGAAAAATGAAGTTAAGGCGGAAGACCCTTGCCAAGTGGCTTAAGGAAAGCATTTTGAGATTAGGCCCTACATTCATTAAAATTGGTCAGCAGTTCTCCACTAGGGTGGATATTCTTCCTCAAGAGTATGTTGACCAGTTGTCCGAACTTCAGGATCAAGTGCCTCCATTTCCCTCTGAGACTGCTATAGCTATTGTTGAAGAGGAGCTCGGAGCTTCTGTAGGTGATATCTTTGATCAGTTTGACTATGAACCAATAGCTGCTGCAAGTCTTGGTCAGGTTCATCGGGCAAGATTGAAAGGACAAGAGGTTGTTGTTAAAGTGCAAAGGCCTGGTCTCAAGGATCTTTTTGATATTGATCTAAAAAACCTGAGGGTTATTGCCGAATATCTTCAAAAAATTGATCCAAAGTCGGATGGTGCAAAGAGGGATTGGGTTGCTATTTATGATGAATGTGCCTCTGTCTTATATCAGGAGATTGATTACACCAAGGAGGCTGCTAATGCTGAATTGTTTGCAAGTAACTTTAAGAACATGAGTTATGTGAAAGTTCCTACAATCTACTGGGATTATACCACACCACAGATTCTGACAATGGAATATGTTCCAGGAATTAAAATAAACAAAATACAAGCTTTAGATCAACTTGGTGTTGATCGCACAAGGCTAGGGAGATATGCAGTTGAGTCGTTCCTGGAGCAAATTTTATCGCATGGTTTCTTCCATGCTGACCCTCATCCTGGAAATATTGCAGTTGATGATGTTAATGGTGGAAGGTTGATCTACTATGATTTGGAATGA 1377 0.4379 MATSSLLHLPELHFLSPQIPHRNRFSLSTYSISRLSTSNVALRTTRIRASKEESALAERVNDVKWSGNGAASRAGDNKASGGYVNGAVKKSPGDYGYRNGVAATEVVDVEVSKVNEDGRKRRLEEIGKEDAWFKQTEKVKVEVAVAPGGRWSRFKTYSTIQRTLEIWGFVVTFIFKAWLDNQKFSYKGGMTEGKMKLRRKTLAKWLKESILRLGPTFIKIGQQFSTRVDILPQEYVDQLSELQDQVPPFPSETAIAIVEEELGASVGDIFDQFDYEPIAAASLGQVHRARLKGQEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDYTKEAANAELFASNFKNMSYVKVPTIYWDYTTPQILTMEYVPGIKINKIQALDQLGVDRTRLGRYAVESFLEQILSHGFFHADPHPGNIAVDDVNGGRLIYYDLE* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1569 458 Pfam ABC1 atypical kinase-like domain 241 456 IPR004147 -
Psa5g1569 458 PANTHER ABC TRANSPORTER-LIKE PROTEIN 3 457 - -
Psa5g1569 458 CDD ABC1_ADCK3-like 242 457 - -
Psa5g1569 458 SUPERFAMILY Protein kinase-like (PK-like) 243 446 IPR011009 -
Psa5g1569 458 PANTHER CHAPERONE-ACTIVITY OF BC1 COMPLEX CABC1 -RELATED 3 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1569 Psa-Chr5 123558859 123574568 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1569 - - gmx:100791330 762.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g1569 5 123558859 123574568 Psa5g1569 5 123558859 123574568 ECH