Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1525 ATGTCTTTGACTCTCAGTCTCACCATTACAACACCGCGTTTCTCACAACTACATCACCGGAACTCATCGCCCATTCTCAAATTCAAACACAATTCACCACTTTCCTTCACTCGTGCATCTTCCTCTATGTCAACCACATCCTTATCTCATCTCAGCGTCGACGAAGATTTGCCGCCAAATTACGGAGACTGGCTTCCCAAACCCGAACTTCACCTCCGTAGAAGAGCCGGCATTCTTCTCCATCCGACGTCGTTTCAAAGTCCATACGGAATCGGCGATCTTGGAATTGAGGCATTTCGTTTCATTGACTGGCTTCACCGAACCGGTTGCTCTCTTTGGCAGGTTCTTCCTCTCGTGCCTCCGGGAAGAAAGGCTAACGAAGAAGGATCTCCTTACTCAGGCCAGGATGCGAATTGTGGTAACACACTTTTGATTTCTCTTGAGGAGCTTGTTGAGGATGGATTGTTGGAAAAACACGAGCTTCCCGAACCAATTGAGGCGGAGCGTGTGAATTTTTCGGTTGTTGCTAATCTTAAGGATCCTTTGATAACTAAAGCTGCGGAGAGGCTTATTTCAAGCAAAGGGGAACTCAAAACACAGCTTGAAAATTTTCGCAGGGATCCTAACATATCAAGTTGGCTTGAAGATGCAGCTTATTTTGCTGCTATTGATGACAGCTTGAACACACTCAGTTGGTACGAATGGCCCGAACCCTTAAAAAACCGTCATCTTGTGGCTCTAGAAGATATTTATGAACAAAAGCGAGATTTTATAAATGTATTTATTGCTCAACAATTCTTGTTCCAAAGACAATGGCAGAAGGTTCGCAACTATGCACAGAGTAGGGGAATCAGAATAATGGGAGACATGCCCATTTATGTTGGTTATCACAGTGCAGATGTTTGGGCAAATAAGAACCAGTTTGCACTGAACAAGAAAGGTTTTCCTCTTTTAGTCAGTGGTGTGCCTCCTGATGCATTCAGCGAAACTGGTCAGCTGTGGGGAAGCCCCCTGTATGATTGGAAAGCCATGGAGAAAGAGGGGTATTCATGGTGGATACGCCGCATACGACGTGCACAAGATATATATGACGAATTTAGAATTGACCACTTTAGAGGACTTGCTGGATACTGGGCTGTTCCCTCTGAAGCTAAAATAGCTTTGGTTGGAAAGTGGAAGGTAGGACCTGGAACATCCTTCTTTAGTGCCATTTCCAAAGCTGTGGGAAGGATTAATATCACAGCAGAAGACTTGGGAGTTATCACTGAGGATGTAGTGCAACTAAGGAAATCCATTGGAGCCCCTGGAATGGCTGTCCTCCAGTTTGGGTTTGGAGGTGGTCCCGATAACCCTCATTTGCCTCATAATCACGAGTGCAATCAAGTTGTCTATACAGGGACTCATGACAATGACACGATTAAGGGTTGGTGGGAAGCTTTAAACCAAGAAGAGAAATCACATGTATTAAGTTATATTTCATTAACCGAGCAAGATGATATTCCTTGGGCACTAATCCAGACAGCGCTGGCTTCCGTTGCTCAAACAGCAATAGTACCTATGCAAGATGTTCTTGGACTTGGGAGTTCTGCCAGGATGAATATTCCTGCAACTCAGTTTGGAAACTGGGGATGGAGGGTTCCAAGTTCTGTGAACTTTGACAGAAGGAGAAAGAGAAAGGAAAAGATAGGTATGAAGAACCTGAGCTTGAACCTGATTCCGTGTCTACCGGACGACGTTGCTGTGAACTGTCTCGTACGTGTTCCACGCTCTCAACACACAACCCTCTCTCTTGTTTCGAAATCATTCCGTTCTCTCCTCTCTTCTCCACTCTTCTTCACCGCTCGCTCTCTCCTTCATTCCACCCAACACATCCTCTACCTCTCTATTCGTACACGCGCCTCCACTCTCCAATGGTTCACGCTCCACAACAACCACCACCTCATTCCTCTTCCTCCTCTCCCTTCCCCTGCGATCGGCTCTGCCTACGCAGTCATTGGACATGCAATCTATGTCATCGGCGGTTCAATCAATGATATCCCCTCCCGTCATGTATGGATCCTCGATTGCCGATTCCACCGTTGGCATCCCGGTCCTTCCATGCGCGTCTCACGTGAGTTTGCCGCTGCTGGCGTCGTTGACGGCAAGATTTACGTCATCGGCGGTTGCGTTCCTGATAATTGGTCTAGGTCAGCTAATTGGGCGGAGGTATTTAGTCCTGCTACCAACAGCTGGGAAGGCATTCCCAGCCCGCCGGAGATTCGCGAGAAGTGGATGCACGCCAGTGCAGTTGTAGACGGTAAGATTTACGCCATGGCTGACCGCGGTGGTGTTTCCCTTGATCCTTGTAGCAGCGCGTGGGAGAGTGTGGAGAGTGAACTTGACCTAGGGTGGCGTGGAAGAGCTTGCGTTGTTAATGGGATTCTGTATTGCTACAATTACTTGGGGAAAATCAAAGGTTTCGACGTGAAAGAAAGGTTGTGGAAGGAGTTGAACGGTGTGGAAAAGGGTTTGCCGAGGTTTCTTTGTGGGGCAACAATGGCTGATGTTGGTGGAAAATTGGTTGTGGTTTGGGAGTGCCAAGGGAATGCGACTGAAAAGGGGAAAGAAATGGAGATTTGGTGCGCTGAGATTGATGTGAACAAGAACAGAGATGGGGAATTGTGGGGTGAAGTTTGTTGGTTGAACAATGTTCTCTCTGTTCCAAAAGGATCCTCCATTGTTCATTGTTCTTCGGTTGCCTTGTGA 2745 0.4714 MSLTLSLTITTPRFSQLHHRNSSPILKFKHNSPLSFTRASSSMSTTSLSHLSVDEDLPPNYGDWLPKPELHLRRRAGILLHPTSFQSPYGIGDLGIEAFRFIDWLHRTGCSLWQVLPLVPPGRKANEEGSPYSGQDANCGNTLLISLEELVEDGLLEKHELPEPIEAERVNFSVVANLKDPLITKAAERLISSKGELKTQLENFRRDPNISSWLEDAAYFAAIDDSLNTLSWYEWPEPLKNRHLVALEDIYEQKRDFINVFIAQQFLFQRQWQKVRNYAQSRGIRIMGDMPIYVGYHSADVWANKNQFALNKKGFPLLVSGVPPDAFSETGQLWGSPLYDWKAMEKEGYSWWIRRIRRAQDIYDEFRIDHFRGLAGYWAVPSEAKIALVGKWKVGPGTSFFSAISKAVGRINITAEDLGVITEDVVQLRKSIGAPGMAVLQFGFGGGPDNPHLPHNHECNQVVYTGTHDNDTIKGWWEALNQEEKSHVLSYISLTEQDDIPWALIQTALASVAQTAIVPMQDVLGLGSSARMNIPATQFGNWGWRVPSSVNFDRRRKRKEKIGMKNLSLNLIPCLPDDVAVNCLVRVPRSQHTTLSLVSKSFRSLLSSPLFFTARSLLHSTQHILYLSIRTRASTLQWFTLHNNHHLIPLPPLPSPAIGSAYAVIGHAIYVIGGSINDIPSRHVWILDCRFHRWHPGPSMRVSREFAAAGVVDGKIYVIGGCVPDNWSRSANWAEVFSPATNSWEGIPSPPEIREKWMHASAVVDGKIYAMADRGGVSLDPCSSAWESVESELDLGWRGRACVVNGILYCYNYLGKIKGFDVKERLWKELNGVEKGLPRFLCGATMADVGGKLVVVWECQGNATEKGKEMEIWCAEIDVNKNRDGELWGEVCWLNNVLSVPKGSSIVHCSSVAL* 915
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1525 914 Pfam Kelch motif 660 701 IPR006652 GO:0005515
Psa5g1525 914 Pfam Kelch motif 704 751 IPR006652 GO:0005515
Psa5g1525 914 SUPERFAMILY (Trans)glycosidases 54 559 IPR017853 -
Psa5g1525 914 SMART kelc_smart 715 766 IPR006652 GO:0005515
Psa5g1525 914 SMART kelc_smart 668 714 IPR006652 GO:0005515
Psa5g1525 914 SUPERFAMILY F-box domain 568 656 IPR036047 GO:0005515
Psa5g1525 914 Gene3D Glycosidases 71 567 - -
Psa5g1525 914 Gene3D - 617 886 IPR015915 GO:0005515
Psa5g1525 914 Coils Coil 187 207 - -
Psa5g1525 914 SUPERFAMILY Kelch motif 643 896 IPR015915 GO:0005515
Psa5g1525 914 TIGRFAM malQ: 4-alpha-glucanotransferase 70 549 IPR003385 GO:0004134|GO:0005975
Psa5g1525 914 Pfam 4-alpha-glucanotransferase 80 547 IPR003385 GO:0004134|GO:0005975
Psa5g1525 914 SMART fbox_2 575 615 IPR001810 GO:0005515
Psa5g1525 914 PANTHER 4-ALPHA-GLUCANOTRANSFERASE DPE1, CHLOROPLASTIC/AMYLOPLASTIC 34 561 IPR003385 GO:0004134|GO:0005975
Psa5g1525 914 Pfam F-box domain 573 610 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1525 Psa-Chr5 116658494 116665645 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g1525 25 562 Glycoside Hydrolase AT5G64860 70.818 0.0 818
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1525 K00705 - gmx:100795007 931.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g1525 5 116658494 116665645 Psa5g1525 5 116658494 116665645 ECH