Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1511 ATGGCTAGAACTAAAGTATCCATAAAAACACTTTTTTTAATACTTTTTCTAGCTTATGGCACCATAAAATGTGTTCATGGGGCTGAGTCCATACAGGGTCTTGGTATCAATTGGGGTGCTCTTGCATCACACCCTATGGATCCTCACATTGTTGCAAATATGTTGAAGGACAATGGAATCCACAAGGTTAAACTTTTTGATGCAGATTCTTGGGTCGTTAGCGCTTTTTCGGGTACGGGAATTGAAGTTATGGTTGGAATTCCTAATGATCAATTGAGTAAATTTGCGAGAAGTAGTTCGGATGCAGAAGATTGGGTAAAACAAAATGTCACCAAACATCTTTATAACGGAGGGGTGAATATCAGATACGTGTCGGTTGGAAATGAGCCATTCTTGAAAAGTTATAATGGTTCATATGTGAAGTTAACGTTTCCGGCTATGCAAAATATTCAAAAGGCAATTGATAAAGCCGGGCTTAGAGAAAAAATAAAGGTGACAACAGCTTTGAATGCAGATGTTTACGAGTCTAGTTCAAACAAACCGTCCGACGGTGATTTTCGAGACAACATTCGCGACGATATGAAACAAATACTTCAATTTCTCCATGAAACAGATTCGCCATTCATTGTCAACATATATCCTTTCCTTAGTCTATATCAAAGCGAAAGTTTTCCGAAAGATTTTGCATTCTTTGATACTCAAAGTAGAACAATTAGTGACAATAATGCACAGTACAACAACGTGTTTGACGCAAATTTAGATACACTTGTTTGGGCATTAAGAAAAGCCGGTTACCATGACATGAAAATTGTCGTTGGTGAAATCGGTTGGCCAACCGATGGTAACCAAAACGCTAATTCAAATAATGCAAAAAGATTTTATCAAGGGTTTCTTAAAAAATTGGCTAACAAACAAGGTACTCCAATTCGCCCCGGGTCTATGGAAGTTTATCTATTCGCTCTTTTCGACGAGAATCTAAAGAGTATCGAACCGGGTAATTTCGAACGTCATTGGGGAATTTTTCGCTACGATGGAAAGGCAAAGTTTCCTATAGACTTTTCAGGTAACGGACAAGAGAAATGGCCACAAGAAGCAAAGGGCGTTGTATACCAAGAACACAAATGGTGTGTTCTAAGCGCAGAAGTTAAGAATTTGAGTTTAGTCCCGTCGGCATTAGACTATGCTTGTGCCAATGCTGATTGTACAAGTTTAGGATATGGTTGTTCATGTGACAATTTAAACCTAGCTGGTAATGCATCTTTTGCTTTTAATCAATATTTTCAAACAAGAGACCAAAGTGTTGAGGCATGTAATTTCAATGGATTGGCTAGTATTGTAACAGAAGATCCATCAAAGGGAACTTGCTTGTTTCCTATAGAAATTGAGAGTAGCGGTGACATGGTGACGGCTACGAGGATTGTGACAAGTCTTTTGATTGGATTGTCAATGTTTTTTATAACATCATGA 1467 0.381 MARTKVSIKTLFLILFLAYGTIKCVHGAESIQGLGINWGALASHPMDPHIVANMLKDNGIHKVKLFDADSWVVSAFSGTGIEVMVGIPNDQLSKFARSSSDAEDWVKQNVTKHLYNGGVNIRYVSVGNEPFLKSYNGSYVKLTFPAMQNIQKAIDKAGLREKIKVTTALNADVYESSSNKPSDGDFRDNIRDDMKQILQFLHETDSPFIVNIYPFLSLYQSESFPKDFAFFDTQSRTISDNNAQYNNVFDANLDTLVWALRKAGYHDMKIVVGEIGWPTDGNQNANSNNAKRFYQGFLKKLANKQGTPIRPGSMEVYLFALFDENLKSIEPGNFERHWGIFRYDGKAKFPIDFSGNGQEKWPQEAKGVVYQEHKWCVLSAEVKNLSLVPSALDYACANADCTSLGYGCSCDNLNLAGNASFAFNQYFQTRDQSVEACNFNGLASIVTEDPSKGTCLFPIEIESSGDMVTATRIVTSLLIGLSMFFITS* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1511 488 Pfam Glycosyl hydrolases family 17 34 353 IPR000490 GO:0004553|GO:0005975
Psa5g1511 488 Gene3D - 368 464 - -
Psa5g1511 488 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE-LIKE PROTEIN 3 473 - -
Psa5g1511 488 SMART X8_cls 374 457 IPR012946 -
Psa5g1511 488 ProSitePatterns Glycosyl hydrolases family 17 signature. 268 281 IPR000490 GO:0004553|GO:0005975
Psa5g1511 488 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 3 473 IPR044965 GO:0004553|GO:0005975
Psa5g1511 488 Pfam X8 domain 374 444 IPR012946 -
Psa5g1511 488 SUPERFAMILY (Trans)glycosidases 34 353 IPR017853 -
Psa5g1511 488 Gene3D Glycosidases 32 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1511 Psa-Chr5 115888775 115890439 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g1511 28 466 Miscellaneous Gene Families AT5G64790 55.353 0.0 533
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1511 - - gmx:100794658 759.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g1511 5 115888775 115890439 Psa5g1511 5 115888775 115890439 ECH