Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1508 ATGACAATGTTACCAAGTCTGCACCTCATCCTTCTCCCATTAATCATCTATCAAACCACCTCCTTTGCCTCTGCGGTTGATCCCACACAAGGTTTCACCCAACTTCCATTAGACAACTCAAACTTCCAAATTCAAAAGCCTTACGACGTCTCAGTAAACCAACGTTACGCCTTTACAAATGGAGTCCACAAATTCTGGATATACCCTACAGACAAGCCTTTCATGTCTGGCAGTAACACACAACCACGAACAGAGATTCGAATCACTGGATACGATTATACATCTGGTATATGGCAGTTTGAAGGGTATGGTTATGTTCCAAGTGGCACAAGCGGGGTTTGTATTATGCAAGTGTTTGGTGGAAGTTCTACTGCGACAACGTCACAGCTTAGAGTATATGATGGTTCGTTAACTTATTATAGATCTCCTGTTTTGTCTGCAAATATCTATAATAGGTGGTTCAGAGTGAATGCTATTCATGATGTTGGTGCTAACAATGTTAAGATATATATTGATGGGGATCTTAAGTATAATGGAGATGGTCGTGGAGCTGGTACTCACTACTTCAAGATTGGGGTTTATGTACAGAATGATCCTTCCGGTTACATGGAGTCTCGTTGGAGGGATATGAAGGTTTTTAAGAAATAG 648 0.409 MTMLPSLHLILLPLIIYQTTSFASAVDPTQGFTQLPLDNSNFQIQKPYDVSVNQRYAFTNGVHKFWIYPTDKPFMSGSNTQPRTEIRITGYDYTSGIWQFEGYGYVPSGTSGVCIMQVFGGSSTATTSQLRVYDGSLTYYRSPVLSANIYNRWFRVNAIHDVGANNVKIYIDGDLKYNGDGRGAGTHYFKIGVYVQNDPSGYMESRWRDMKVFKK* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1508 215 Gene3D - 33 214 - -
Psa5g1508 215 SUPERFAMILY Concanavalin A-like lectins/glucanases 35 204 IPR013320 -
Psa5g1508 215 Pfam Alginate lyase 38 213 IPR014895 -
Psa5g1508 215 PANTHER ALGINATE LYASE 3 215 - -
Psa5g1508 215 PANTHER BINDING PROTEIN, PUTATIVE, EXPRESSED-RELATED 3 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1508 Psa-Chr5 115818688 115819815 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1508 - - gmx:547636 309.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g1508 5 115818688 115819815 Psa5g1508 5 115818688 115819815 ECH