Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1488 ATGCAAATAACACGATGGCGAAATTTTGTGTCCATGAAGAATCACATTATTCCATCCCTTGAGCATTTCTCAGCTTTTCATTCTACTCCATGTTGTTGTCACAAATGGAAGAGCACTCCCGATATAAAAGGACAGCAACCATCTAAGAATCAAATCAAATTCGTAACTCGTCAAAAGCGCGCTGATGCAAAAAAAGCTTTAAAAAATCTCCTTTACAATAGTGGATCATCAAGATTTTCATTTGAGGACAAAGAAACGAAATGGAAATCTGATGGAAACTCCAATGATCGTTCAAATAGCCATCCCAATAAAGGTCAACCAAAGTCTGGTCGACGATTTGGTGGAAAACCACAAAAGAAAACTAAGCAAAAAATCAGAAGAGAAAGTTTTTGTGAGGACGTTGATGGCGATGGCCATCCTGAACAGATATTTCAGGCAACATTCGGTAACCGATGTTATACCTGGTCCTACAGCAATATGAGGGGATCTTCTTCTGAACATTCCACATACGGCTTTGAATGGAGGGAAAATACAAATAGGACAAACACAAACAAGTGGAAAAGTGCAAGCGATGATGAGTATGACGATAACGATAAAGATGATGATGATTCATGCTTTGTAGGATCAAGTTCAGATAGAACTATTCTTGGTTTGCCTCCAACAGGTCCATTAAAGATAGAAGACGTTAAAATTGCTTTCCGATTATCAGCTTTAAAATGGCATCCTGATAAACATCAGGGCCCTTCACAGGCAATGGCTGAAGAAAAATTCAAACTATGTGTAAATGCTTACAAAACATTATGCAATGCTCTCTCCCCAGCTTAG 825 0.3855 MQITRWRNFVSMKNHIIPSLEHFSAFHSTPCCCHKWKSTPDIKGQQPSKNQIKFVTRQKRADAKKALKNLLYNSGSSRFSFEDKETKWKSDGNSNDRSNSHPNKGQPKSGRRFGGKPQKKTKQKIRRESFCEDVDGDGHPEQIFQATFGNRCYTWSYSNMRGSSSEHSTYGFEWRENTNRTNTNKWKSASDDEYDDNDKDDDDSCFVGSSSDRTILGLPPTGPLKIEDVKIAFRLSALKWHPDKHQGPSQAMAEEKFKLCVNAYKTLCNALSPA* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1488 274 ProSiteProfiles dnaJ domain profile. 211 272 IPR001623 -
Psa5g1488 274 CDD DnaJ 215 269 IPR001623 -
Psa5g1488 274 SMART dnaj_3 210 272 IPR001623 -
Psa5g1488 274 MobiDBLite consensus disorder prediction 83 134 - -
Psa5g1488 274 Gene3D DnaJ domain 180 272 IPR036869 -
Psa5g1488 274 Pfam DnaJ domain 215 269 IPR001623 -
Psa5g1488 274 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 273 - -
Psa5g1488 274 SUPERFAMILY Chaperone J-domain 204 269 IPR036869 -
Psa5g1488 274 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 1 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1488 Psa-Chr5 114342097 114346024 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1488 - - cam:101501928 451.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g1488 5 114342097 114346024 Psa5g1488 5 114342097 114346024 ECH