Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1475 ATGGGAGCGTCCACGTCATCGGAGCCGAGGGTTCCGGCGGAACAGCAGGAGGCGGAAAACGTCGCAGCCTCCACCGGAGCTCTTCCTATACTTCAAAAAGCTTTCTCCAAGTTCGCCAATTCCGAAACAAACGCAATTCCCTTAGAAAATCTACAGCAATGCTTCGGTTTCGCTCGCGAAGGTCGAAGTTACTATGCAGAAAACGCGAAAGATTCATTTCCGGTGTTATTGGATCACTTAGGTTCATCCTTAGTTGATCACTTTTTCATTTCTGGTAAAGGAGGAATAAATTGGGTTGAATTTGTGAAAGGCTATAACAAGTGTTGTGCTAGGGTATCTGCTTCCACTTTGCTGAACAAGTTTATTAGAGTATTCATTGATGTTACAAGAAAAGCTGATGTGCCTGTGAATTTGGAATTTGAATCAGAGGATGCTGATTGCAAGGCGAACGGGTACCTTCTTCCCAACCATGTGTTTCTGCTTCTTTCCGTATGTTGGGCTATGTCTTGGGATGGTAGAAATTTGAAAGGGAAAGGAAATGTGAGTGTACCTGATCTGAGTCATTTGGTATTGTCAGCGGTTACAGCGTGCGTTGAAGATAAAGATGGGTTTGATGTATGGAATTGTGATATCTCAAGCTTGGAAGTTCAGCTTCCTGCTGGGAAGTTTGTTACATGGGTTATGAGTACAGTGCCATGCCTCCCTGATTGCTTAACGCTGTATTTTCATGCAAGACTGAAAATGCTAGTAACTGAAGGGGATGAATTGGCATCCTCTGATTCCTCCTCTGTTGAAGAAATCTCATCTACAGCTGCATGTGATTATATTTTAACCCAAGGAAGGGCGTGGACAATTTCTATCACTCAGAGAAGTGTAGTAAATGAAGAGATTTCTAGAGCCTTTATGAGCAGTGGAGCTGGAATGAATGATAACCTTATTTATCGTTCATCAACCCATGGAAGAGGCCTCAACAGATTTTGGTCTCGTGTTGAAGGCTACCACGGTCCGTTGCTAATTTTGGTTGCTGCAAGTTCGGGAAATGATCATGAGGGAAATTCTGCAATCAAGAAATTTGTTATAGGCGCCCAAACAAATGAAGGTCTTGAAAATAAAGATATCTTCTATGGAACCACTGGTTGTTTATATTCTTTAAACCCAGTGTTTCATGTATTTCCACCTACTGGCAAGGAAAAGAACTTTGTTTATAGCCACCTGCATCCTACTGGCAGAGCATACCAATCACATCCAAAGCCAGTTGGAGTTGCATTTGGAGGAACTCCGGGAAATGAGAGAATATATATTGATGAAGATTTTTCCAAAGTGACCATTCGCCACCATGCTGTTGACAAAACTTACCAGAGTGGTTCCCTCCTTCCGGATCAGGTACAACTTACTGTGTGTATACACAGCTTCTAA 1416 0.4258 MGASTSSEPRVPAEQQEAENVAASTGALPILQKAFSKFANSETNAIPLENLQQCFGFAREGRSYYAENAKDSFPVLLDHLGSSLVDHFFISGKGGINWVEFVKGYNKCCARVSASTLLNKFIRVFIDVTRKADVPVNLEFESEDADCKANGYLLPNHVFLLLSVCWAMSWDGRNLKGKGNVSVPDLSHLVLSAVTACVEDKDGFDVWNCDISSLEVQLPAGKFVTWVMSTVPCLPDCLTLYFHARLKMLVTEGDELASSDSSSVEEISSTAACDYILTQGRAWTISITQRSVVNEEISRAFMSSGAGMNDNLIYRSSTHGRGLNRFWSRVEGYHGPLLILVAASSGNDHEGNSAIKKFVIGAQTNEGLENKDIFYGTTGCLYSLNPVFHVFPPTGKEKNFVYSHLHPTGRAYQSHPKPVGVAFGGTPGNERIYIDEDFSKVTIRHHAVDKTYQSGSLLPDQVQLTVCIHSF* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1475 471 ProSiteProfiles TLDc domain profile. 283 452 IPR006571 -
Psa5g1475 471 PANTHER TLD-DOMAIN CONTAINING NUCLEOLAR PROTEIN 1 463 - -
Psa5g1475 471 Pfam TLD 312 459 IPR006571 -
Psa5g1475 471 SMART 109ultra 290 468 IPR006571 -
Psa5g1475 471 PANTHER NUCLEOLAR PROTEIN 7/ESTROGEN RECEPTOR COACTIVATOR-RELATED 1 463 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1475 - - gmx:100786867 717.227