Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1458 ATGTCGAATCTCGAGCCAGCGGCGCCGCACACGCTGATTCGACGTCCGTCGAGGAGCGCTGCAATGACCACCTTTTCGATGGAGGTTTTTGACAATGATGTTGTTGTTCCTTCGTCACTCGCCTCGATAACGCCCATTCTCCGTGTGGCTAATGAGATTGAAAGTGATCGCCCAAGGGTGGCTTATTTATGTCGATTCTATGCGTTCGAAAAGACACACAGGTTGGATCAGAGTTCTAGCGGACGTGGTGTGAGACAGTTTAAAACATTGCTGCTGCAACGATTGGAGAGGGACAATGCTACCAGTCTTGAATCTCGGACGAAGAAGACAGATGCAAGAGAAATCCAAGCTTATTATCAGCAATACTATGAGAATTATGTCAAAGCACTTGACCAAGGAGAGCAGGCAGACAGAGCACAGCTGGGTAAAGCTTATCAGACCGCCGGTGTGCTTTTTGAAGTGCTCTGTGCTGTCAACAAGACTGAGAAAGTTGAAGAAGTTGCTCCCGAGATTATTGCAGCTGCTAGAGATGTCCAGGAAAAGACGGAAATTTATGCACCTTTTAACATTCTTCCGTTGGATTCTGCCGGGGCTTCTCAGCCTATTATGCAGCTTGAAGAGATTAAGGCCGCTGTTTCTGCGCTATGGAATACCCGTGGCTTGAACTGGCCTAGTTCATTCGAGCAAAGTCGCCAGAGAACTGGAGAGTTGGATCTGCTTGATTGGCTCAGAGCCATGTTTGGGTTCCAGAAAGACAATGTCAGGAACCAGAGAGAGCATCTAATTCTGCTTCTTGCTAACAACCATATAAGGCTACAACCCAAACCCGAGCCTCTCAACAAGCTTGATGACCGCGCAGTTAATTCAGTGATGAATGATCTCTTTAAGAATTACAAGACGTGGTGCAAATTTTTGGGTCGAAAACATAGTTTACGACTTCCTCAAGGTCAGCAAGATATACAGCAGAGGAAGTTGCTTTATATGAGCTTGTATCTTCTCATATGGGGTGAAGCATCCAATCTTCGCTTCATGCCAGAGTGCCTATGCTACATATTTCACAATATGGCATATGAACTCCATGGTTTATTGGCTGGAAATGTCAGCATTGTTACTGGTGAAAACATCAAACCTTCTTATGGTGGTGATGATGAGGCATTCTTGCGCAAGGTTGTAACTCCGATATACAAAGTCATTCAAACGGAAGCTGAGAAGAGCAAAAATGGGACGGCTCCTCACTCAGCCTGGTGCAATTACGATGATTTAAATGAGTATTTCTGGTCACCTGATTGCTTTTCTCTTGGATGGCCCATGCGTGATGATGGTGAATTTTTTAAATCTACATTTCATTTCACACAGGGAAGAAAGGGTGCTCCGGCAAAATCTGCAAGAACTGGCAAATCAAATTTTGTTGAGACCCGGTCGTTCTGGAACCTCTTCCGTACTTTTGACCGTCTTTGGACCTTTTATTTACTGGGTTTGCAGGCATTGTTCATACTTGCATGGGGAGATATTTCATTGTTGGAAATATTTAAGAAAGATGTCTTATATAAACTCTCTAGCATATTCATCACAGCAGCCATTCTTCGTTTCCTTCAAAGTATTTTGGACATGACTCTGAACTTCCCCGGCTTTCATCGCTGGAGATTCACTGATGTGCTAAGAAATGTTCTCAAAGTCATTGTTAGTCTTTTTTGGGTTATTGTTCTTCCACTATTATACGTGCATTCCTTCAACGGTTCTCCAGAGTTTATCAGGAAGTTGGTTTCCTTTGTTCATCAAGTGAAAGGGATTCCACCATATTATGTCTTAGCAGTTGGAGCATATTTGATCCCAAATGTACTAGCAGCCATACTCTTTCTTTTCCCAATGCTTAGGCGTTGGATTGAAAACTCAGACTGGCACATATTTAGACTCCTCTTATGGTGGTCACAGCCAAGAATCTATGTCGGACGAGGGATGCATGAGAGTCAATTTGCTCTCCTTAAGTACACTCTTTTTTGGGTGCTTCTTTTGGCTGCCAAATTTTCATTCAGCTTTTTTGTCCAGATCAAGCCTCTTGTTAAGCCAACTAAAGATATAATGAGCATTCGACATATTGATTATGGCTGGCATGAGTTTTTTCCAAATGCTCAAAATAATTATGGTGCAGTTGCTGCACTCTGGGCTCCTGTACTTATGGTTTATTTCATGGACACCCAAATTTGGTATTCCATCTTCTCAACTGTGTGTGGTGGTGTTCTTGGAGCCTTTGATCGTCTGGGAGAGATACGCACTCTGAGCATGCTCAGATCACGGTTTCAGTCATTACCTGGTGCATTCAACACTTACTTGGTTCCTACTGACAAGAGAAAGAAAAAGGGATTCTCTCTCTCAAAGGGATTTGCCGAGATTTCCGCAAACAGAAGGAGTGAGGCTGCTAAGTTTGCCCAATTATGGAACGAAATTATTTGCAGTTTCCGCGAGGAAGATATTATAAGTGATAGGAAAGGCCTCAAAGTCAAACTCTTTAGTTTCTTTTCTTTGGAGATGGACCTTTTGTTGGTTCCTTACTCATCAGATCCTAGCTTGAAAATAATTCAATGGCCACCATTTATGCTTGCAAGCAAGATTCCTATTGCACTGGATATGGCAGCTCAATTTCGAGGAAGGGACTGTGATCTTTGGAAACGCATATGTGCAGACGAATATATGAAATGCGCGGTCATTGAAAGCTATGAAACTTTCAAACATATTTTGAGCGCGTTAGTGGTCGGAGAAGCTGAAAAAAGGACAATCTCTGTCATCATAAAGGAAGTTGAAAACAGCATCTCTAAAAATACACTTCTTACGAATTTCCGAATGGGATTTTTGCCTTCCCTTTGCAAGAAATTTGTTGAGCTTGTCGAAATTTTGAAAGATGCAGATCTATCCAAGAAAGACACAGTGGTGGTATTGTTGCAAGACATGTTAGAAGTGTTTACTCGTGATATGATGGTGAATGAAATCAGCGAATTAGCAGAACTTAATCTAAGTAGCAAGGATACCGGAAGGCAACTTTTTGCTGGTACTGATGTAAAACCGGCTGTACTCTTCCCTCCAGTTGTTACAGCACAATGGGAGGAACAGATTAGACGTCTTCACTTACTGTTGACAGTGAAGGAATCTGCCATTGAGATTCCAACAAACCTTGAAGCACGCAGAAGGATTGCATTCTTTACCAATTCGCTGTTCATGGATATGCCTCGTGCTCCTAGAGTTCGTAAAATGCTCTCGTTCAGTGTCATGACTCCATACTACAGTGAAGAGACTGTCTACTCGAAGAATGACCTTGAGGTTGAAAATGAAGATGGTGTGTCAATCATATATTATCTTCAGAAGATATACCCTGATGAGTGGAATAACTTCATGGAACGAATTGAGTGTAAGAAAGATAGTGAGGTATGGGAAAGAGATGATAATATATTGCAGCTACGTCATTGGGCCTCATTACGAGGGCAAACACTTTGCAGGACAGTTAGGGGAATGATGTACTACCGGCGTGCTCTTAAGCTCCAGGCTTTTCTTGATATGGCTAATGAAAAGGAGATACTTGATGGATATAAAGCTGTTACTGTTCCATCTGAGGAAGATAAAAAGAGCCACAGATCACTATATGCCAGTTTAGAGGCTGTTGCTGACATGAAATTCACATACATTGCTACCTGTCAGAACTACGGAAATCAGAAGCGTAGTGGAGACCGTCGTGCCACAGACATTCTGAATTTGATGGTTAACAATCCTTCGCTTCGTGTGGCATTTATTGATGAGGTTGAAGAAAGAGAAGGAGGAAAAGTACAGAAAGTTTATTACTCTGTATTGGTCAAAGCTGTGGACAATCATGACCAGGAAATATATCGAATAAAACTGCCAGGTCCAGCGAAGTTAGGAGAAGGGAAACCTGAAAATCAAAACCATGCAATCATTTTTACTAGAGGAGAAGCTCTTCAGGCTATCGACATGAACCAGGATAATTACTTGGAAGAAGCTTTAAAAATGCGTAACCTTCTTGAGGAGTTTAATGAGGATCATGGGGTGCGCCGACCTACGATATTAGGTGTTCGTGAGCATATCTTCACTGGCAGTGTTTCTTCCTTGGCTTGGTTTATGTCAAATCAAGAAACAAGCTTTGTCACAATTGGTCAAAGAGTTCTTGCAAGACCTCTGAAGGTACGATTTCACTATGGTCATCCAGATGTTTTTGATAGAATTTTTCACATTACCCGGGGAGGAATGAGTAAGGCTTCTTGTGGCATCCATTTGAGTGAGGATATTTTTGCCGGATTCAACTCAACACTACGACGTGGGAATATTACTCATCATGAATACATTCAAGTTGGAAAGGGTAGAGATGTTGGGCTCAATCAGATCTCTCTTTTTGAAGCAAAGGTGGCTTGCGGTAACGGAGAGCAAATACTAAGCAGAGATGTCTACAGGCTGGGGCATCGTTATGACTTTTTCCGCATGCTATCATTTTATTTTACGACCATTGGATTTTATACCAGCTCAATGATTGTGGTCCTTACGTCTTATGCTTTCCTATATGGCAAACTGTACCTGTCATTAAGTGGATTTGAGGCTGCAATAGTGAAGTTTGCTAAGAGAAAGGGAGAGGATACATTAATGGCAGCAATAGCTTCACAATCAATTGTTCAAATTGGACTTCTAACGACTTTGCCCATGGTCATGGAAATTGGACTAGAGAGAGGGTTCAGAACTGCTCTAGGTGACTTCATAATAATGCAGTTACAGCTGGCACCTGTTTTCTTTACTTTCTCGCTTGGAACGAAAATGCACTATTTTGGGCGCACTCTCCTGCACGGAGGGGCAAAGTACAGAGCAACTGGGCGTGGATTTGTCGTTCGTCATGAAAAGTTTGCAGACAATTACAGGATGTACTCTAGGAGTCACTTTGTCAAAGGGATTGAGCTCACAATATTGCTCATCTGTTATATGATTTATGGAGCAGCAACACCTGACTCAGCAGCATACGCTCTTCTGTCATGGTCAATGTGGTTTTTGGTTTGCTCTTGGTTGTTTGCTCCTTTCCTTTTCAATCCATCAGGATTTGAATGGCAGAAGATAGTTGAGGACTGGGATGATTGGACTAAATGGATTAGTAACCGAGGTGGTATTGGTGTTCCTTCAAACAAGAGTTGGGAGTCATGGTGGGATGAGGAACAGGAGCATCTGCAGCACACTGGTATTATAGGTCGGATTTGTGAGATTCTTCTTTCCCTGCGTTTCTTTATCTATCAGTATGGGATTGTGTATCATCTCAATGTAGCCAGAGGTGACAAGGGTATCATGGTTTATGCTCTGTCCTGGATTGTAATAGTAGCTGTCATGGTTATCTTGAAGATTGTGTCCTTGGGTAGAAAGAGGTTCAGCGCAGATTTTCAGTTGATGTTTCGTCTTCTCAAATTGTTTCTGTTTATTGGAGCCGTTGTTTGCCTGGCCCTGATGTTTACTCTGCTTAGCCTCACAGTCGGAGACATCTTTGCCAGCCTTTTGGCCTTTTTGCCAACAGCATGGGCAATTATACAGATAGCACAAGCATGCAGGCCATTGGTGAAAGGCATTGGAATGTGGGGGTCTGTTAAAGCTTTAGCTAGGGGCTACGAATACCTAATGGCAGTGGTTATATTTACACCAGTGGCCATACTGGCATGGTTCCCATTTGTTTCAGAATTCCAAACTAGGCTTCTGTTCAACCAAGCATTCAGCCGAGGACTTCAAATCCAGCGCATTCTGGCCGGTGGCAAGAAACATAAGCAAAGCTGA 5799 0.4259 MSNLEPAAPHTLIRRPSRSAAMTTFSMEVFDNDVVVPSSLASITPILRVANEIESDRPRVAYLCRFYAFEKTHRLDQSSSGRGVRQFKTLLLQRLERDNATSLESRTKKTDAREIQAYYQQYYENYVKALDQGEQADRAQLGKAYQTAGVLFEVLCAVNKTEKVEEVAPEIIAAARDVQEKTEIYAPFNILPLDSAGASQPIMQLEEIKAAVSALWNTRGLNWPSSFEQSRQRTGELDLLDWLRAMFGFQKDNVRNQREHLILLLANNHIRLQPKPEPLNKLDDRAVNSVMNDLFKNYKTWCKFLGRKHSLRLPQGQQDIQQRKLLYMSLYLLIWGEASNLRFMPECLCYIFHNMAYELHGLLAGNVSIVTGENIKPSYGGDDEAFLRKVVTPIYKVIQTEAEKSKNGTAPHSAWCNYDDLNEYFWSPDCFSLGWPMRDDGEFFKSTFHFTQGRKGAPAKSARTGKSNFVETRSFWNLFRTFDRLWTFYLLGLQALFILAWGDISLLEIFKKDVLYKLSSIFITAAILRFLQSILDMTLNFPGFHRWRFTDVLRNVLKVIVSLFWVIVLPLLYVHSFNGSPEFIRKLVSFVHQVKGIPPYYVLAVGAYLIPNVLAAILFLFPMLRRWIENSDWHIFRLLLWWSQPRIYVGRGMHESQFALLKYTLFWVLLLAAKFSFSFFVQIKPLVKPTKDIMSIRHIDYGWHEFFPNAQNNYGAVAALWAPVLMVYFMDTQIWYSIFSTVCGGVLGAFDRLGEIRTLSMLRSRFQSLPGAFNTYLVPTDKRKKKGFSLSKGFAEISANRRSEAAKFAQLWNEIICSFREEDIISDRKGLKVKLFSFFSLEMDLLLVPYSSDPSLKIIQWPPFMLASKIPIALDMAAQFRGRDCDLWKRICADEYMKCAVIESYETFKHILSALVVGEAEKRTISVIIKEVENSISKNTLLTNFRMGFLPSLCKKFVELVEILKDADLSKKDTVVVLLQDMLEVFTRDMMVNEISELAELNLSSKDTGRQLFAGTDVKPAVLFPPVVTAQWEEQIRRLHLLLTVKESAIEIPTNLEARRRIAFFTNSLFMDMPRAPRVRKMLSFSVMTPYYSEETVYSKNDLEVENEDGVSIIYYLQKIYPDEWNNFMERIECKKDSEVWERDDNILQLRHWASLRGQTLCRTVRGMMYYRRALKLQAFLDMANEKEILDGYKAVTVPSEEDKKSHRSLYASLEAVADMKFTYIATCQNYGNQKRSGDRRATDILNLMVNNPSLRVAFIDEVEEREGGKVQKVYYSVLVKAVDNHDQEIYRIKLPGPAKLGEGKPENQNHAIIFTRGEALQAIDMNQDNYLEEALKMRNLLEEFNEDHGVRRPTILGVREHIFTGSVSSLAWFMSNQETSFVTIGQRVLARPLKVRFHYGHPDVFDRIFHITRGGMSKASCGIHLSEDIFAGFNSTLRRGNITHHEYIQVGKGRDVGLNQISLFEAKVACGNGEQILSRDVYRLGHRYDFFRMLSFYFTTIGFYTSSMIVVLTSYAFLYGKLYLSLSGFEAAIVKFAKRKGEDTLMAAIASQSIVQIGLLTTLPMVMEIGLERGFRTALGDFIIMQLQLAPVFFTFSLGTKMHYFGRTLLHGGAKYRATGRGFVVRHEKFADNYRMYSRSHFVKGIELTILLICYMIYGAATPDSAAYALLSWSMWFLVCSWLFAPFLFNPSGFEWQKIVEDWDDWTKWISNRGGIGVPSNKSWESWWDEEQEHLQHTGIIGRICEILLSLRFFIYQYGIVYHLNVARGDKGIMVYALSWIVIVAVMVILKIVSLGRKRFSADFQLMFRLLKLFLFIGAVVCLALMFTLLSLTVGDIFASLLAFLPTAWAIIQIAQACRPLVKGIGMWGSVKALARGYEYLMAVVIFTPVAILAWFPFVSEFQTRLLFNQAFSRGLQIQRILAGGKKHKQS* 1933
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1458 1932 Pfam 1,3-beta-glucan synthase component 1052 1745 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
Psa5g1458 1932 Coils Coil 1328 1348 - -
Psa5g1458 1932 Pfam Vta1 like 42 170 IPR039431 -
Psa5g1458 1932 Gene3D - 29 190 IPR023175 -
Psa5g1458 1932 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 935 948 IPR004838 GO:0003824|GO:0009058|GO:0030170
Psa5g1458 1932 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 9 1929 - -
Psa5g1458 1932 PANTHER GLUCAN SYNTHASE-LIKE PROTEIN 9 1929 - -
Psa5g1458 1932 SMART FKS1_dom1_2 322 438 IPR026899 -
Psa5g1458 1932 Pfam 1,3-beta-glucan synthase subunit FKS1, domain-1 324 435 IPR026899 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1458 Psa-Chr5 112476234 112489736 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g1458 5 1932 Glycosyltransferase AT1G05570 59.736 0.0 2376
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1458 K11000 - gmx:100777245 3495.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g1458 5 112476234 112489736 Psa5g1458 5 112476234 112489736 ECH