Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1455 ATGGCGATCGAAATGCCTCAAGGCTTACCATTCTCCGTAGACACATGGACTCCATCCTCCAAAAGCAGCAAAAGACATCATTTCCTCACACACGCTCACAAAGACCATTCCTCAAACATCACTTCTCATTCCTCTTTCCCTATTTACTCCACTCTTCTCACCAAAACCCTACTTCTCCAACATTACCCTCACCTTCATCCTTCCCTGTTTCTCCAAATCGAAGTAGGTCATTCCTTGATCATCCATGATCCCCACGGGAATTTCACCGTCACCGCTTTTGACGCCAATCACTGTCCTGGTGCCGTCATGTTCTTGTTTGAAGGCCAATTTGGGAATATTTTACACACTGGAGATTGCAGACTCAACCTTGAATGTCTTCTCAATTTACCTGATAAGTATGTAGGGAGGAAAGGAAAAAAGGCTACATGTCCTCTTGATTGTGTTTTCTTAGACTGTACTTTTGGCACTTTCTCTCGTTCCATGCCTACCAAACAATCCTCCATTCAACAGGTTGTTAATTGTATATGGAAGCATCCTGATGCATCGAAAGTGTATCTTACCTGTGATGTCCTCGGTCAGGAAGACATCCTTGTTCAAGTATCCCAAACATTTGGAGCAAAGATATATGTTGATAAAGCCCAAAATCCAGAATGTTTCAAGAATCTAATGGTTACGGCACCTGAAATCCTTTGTGAAGACCCATCTTCTCGTTTCCATTTATTTGATGGATCTCCAGGACTATATGAAAGAGCACAAGCAAAACTGGTTGAGGCCAAGGCAACTCTCCAGACTGAGCCTCTCATTGTCCGCCCTTCTGCTCAGTGGTATGCTTGTGAAGAAGTCTCAGATGTTCAAAACACTAGAAAAAAGAGGATGAGTGAAGCAGTTAGGGATCAATTTGGTGTTTGGCATGTCTGTTACTCAATGCACTCTTCCAAGGAAGAATTGGAAGAGGCACTTCAAATTCTTGCTCCAAGGTGGGTTGTTTCAACAACCCCTACCTGCAGGGCTATGGAGCTCAATTATGTTAAGAAATACTGTTTTAATTCTAAAGCCGGTCTCAATAACTCTGTGTTGAAGCTTCTGGATTTGACTGTGGAAACTTCTGACAATGTTGATGAATTTGTCAAACCAACTGTTATCTTGTGCCAGCCTTGTGCAAAAACTAAATCACCTATCAAGCTGTACAGTGATGCGAAAGCACCGGAAGAGTTGACTCTTCCGAATAATCGCTCGCCTGTCACGTTATTTGGAAGAGCAAGGCTTGGTCTCCAAGATGTCGGCTTTTCACAAGTACCATGCAATATTTTACCAGTTAATCCTTTGCAAACAGATTCAAGTGATGCAAGACAAGAATGTTTAGATGCTGCTGCTGAAGTGAAACGGGAGAGATCACCAGAGAGAAAGGAAGATTTACATAATGTAAATAAGATTCCGCAATCTGAGGTTCAAGTAAACATACGAGCTCATAAGAGTGACTCTGACGAAAATATTGGATCCCTGGGCTTGAGTGAACATATCAAAAAGTATTACAGGCCAATGAATATTCCTGCGCTTCTTCCCTCGTTAGTGGATCTTAGGAATTCCATGAAGCGTGCCAAGAGGAGATTTGATCAGTTTTCTGCGGTTAATCGGAAAATGCCCATGGACTGA 1653 0.4247 MAIEMPQGLPFSVDTWTPSSKSSKRHHFLTHAHKDHSSNITSHSSFPIYSTLLTKTLLLQHYPHLHPSLFLQIEVGHSLIIHDPHGNFTVTAFDANHCPGAVMFLFEGQFGNILHTGDCRLNLECLLNLPDKYVGRKGKKATCPLDCVFLDCTFGTFSRSMPTKQSSIQQVVNCIWKHPDASKVYLTCDVLGQEDILVQVSQTFGAKIYVDKAQNPECFKNLMVTAPEILCEDPSSRFHLFDGSPGLYERAQAKLVEAKATLQTEPLIVRPSAQWYACEEVSDVQNTRKKRMSEAVRDQFGVWHVCYSMHSSKEELEEALQILAPRWVVSTTPTCRAMELNYVKKYCFNSKAGLNNSVLKLLDLTVETSDNVDEFVKPTVILCQPCAKTKSPIKLYSDAKAPEELTLPNNRSPVTLFGRARLGLQDVGFSQVPCNILPVNPLQTDSSDARQECLDAAAEVKRERSPERKEDLHNVNKIPQSEVQVNIRAHKSDSDENIGSLGLSEHIKKYYRPMNIPALLPSLVDLRNSMKRAKRRFDQFSAVNRKMPMD* 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1455 550 PANTHER DNA REPAIR METALLO-BETA-LACTAMASE FAMILY PROTEIN 1 440 - -
Psa5g1455 550 Gene3D - 9 331 IPR036866 -
Psa5g1455 550 Pfam DNA repair metallo-beta-lactamase 229 335 IPR011084 -
Psa5g1455 550 Gene3D - 160 310 - -
Psa5g1455 550 PANTHER DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED 1 440 - -
Psa5g1455 550 SUPERFAMILY Metallo-hydrolase/oxidoreductase 25 335 IPR036866 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1455 Psa-Chr5 112295568 112298201 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1455 K15340 - gmx:100807948 748.814
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g1455 5 112295568 112298201 Psa5g1455 5 112295568 112298201 ECH