LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Psa5g1452	ATGCAAGAATTCACAGTCGTAATTGTTGGTGGTGGTCCTTCTGGCCTAGCAATTTCAGCTTTACTAACACAAAACTCAATCTCTCACACCATACTTGAAAAAGAAGATTGTAATGCTTCTCTTTGGAGGAAAAATGCTTACGATCGTCTAAACCTCCATCTAGCTAGTGAGTTTTGCTCTTTACCTCTCATGCCCCATCCACCCTCAGGCCCAACATACCTAACCAAAGATCAATTTCTTCAATACATAGATAAATATGTCAATCATTTTGACATAAAACCTCGTTATTATTGCGTCGTTGAGTCCGCTAAGTACGATGAAGTTAAGAACAAATGGGTTGTTGAAGCCAAAAACACCCTAGAAGGTACCTTGGAAATTTATGGGGCAAAGTTTCTTGTCATTGCCTCTGGCGAAAATAGTGAAGGTTTTATTCCTAATTTCCATGGATTAGGGAAATTTGAAGGAGATGTGGTACACTCCAAGTACTACAAATCTGGTTCAAAATATAAATCAAAAGATGTTTTGGTTGTTGGGTGTGGTAACTCAGGAATGGAGATTGCATATGATTTGCAAAACTGGGGTGCTAACACTTCCATTGTCATTCGAAATCCGCTTCATGTCTTCACCAGAAATATGATTCGCATAGGGATGCGTTTGGTACACTATTTTCCTGTTTATATTGCAGATACAATCATTACAATTTTAGCAAAGTTAAAATATGGTGATTTGTCCAAATACGGGATTTATCGTCCTAAAGACGGACCTTTATATCTCAAAAACATTACAGGAAAATCTGCAGTTATTGATGTAGGAACCATCGAAAAGATTAAGGAAGGATCTATAAAGGTTGTTCCTTCAGGTATCAAGAAAATAGAGAAGAAGAATGTTATATTTGAAAACAATATGGAGAAAGAGTTTGATGCCATTGTTTTTGCTACCGGCTATAAAAGCGTAGCTAATGAATGGCTAAAGGATTACACATATGCTCTTAATGAGAAAGGGTTCCCTAAAAATCCTTTCCCGAAACATTGGAAGGGAGATCATGGATTGTATTGTGCAGGACTAGCAAGGAAAGGTTTGTTTGGAGTAAAAAAGGATGCTGAGGCAATTGCAGAAGACATCAAACAAACTCTTAAGTTTAATTAA	1146	0.3709	MQEFTVVIVGGGPSGLAISALLTQNSISHTILEKEDCNASLWRKNAYDRLNLHLASEFCSLPLMPHPPSGPTYLTKDQFLQYIDKYVNHFDIKPRYYCVVESAKYDEVKNKWVVEAKNTLEGTLEIYGAKFLVIASGENSEGFIPNFHGLGKFEGDVVHSKYYKSGSKYKSKDVLVVGCGNSGMEIAYDLQNWGANTSIVIRNPLHVFTRNMIRIGMRLVHYFPVYIADTIITILAKLKYGDLSKYGIYRPKDGPLYLKNITGKSAVIDVGTIEKIKEGSIKVVPSGIKKIEKKNVIFENNMEKEFDAIVFATGYKSVANEWLKDYTYALNEKGFPKNPFPKHWKGDHGLYCAGLARKGLFGVKKDAEAIAEDIKQTLKFN*	382

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Psa5g1452	381	PANTHER	FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220)	3	378	-	-
	Psa5g1452	381	SUPERFAMILY	FAD/NAD(P)-binding domain	2	211	IPR036188	-
	Psa5g1452	381	PRINTS	FAD-dependent pyridine nucleotide reductase signature	6	25	-	-
	Psa5g1452	381	PRINTS	FAD-dependent pyridine nucleotide reductase signature	173	191	-	-
	Psa5g1452	381	PRINTS	Pyridine nucleotide disulphide reductase class-II signature	5	27	-	-
	Psa5g1452	381	PRINTS	Pyridine nucleotide disulphide reductase class-II signature	169	193	-	-
	Psa5g1452	381	SUPERFAMILY	FAD/NAD(P)-binding domain	168	360	IPR036188	-
	Psa5g1452	381	PANTHER	INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA10-RELATED	3	378	-	-
	Psa5g1452	381	Gene3D	-	1	380	IPR036188	-
	Psa5g1452	381	Pfam	Pyridine nucleotide-disulphide oxidoreductase	7	204	-	-
	Psa5g1452	381	PIRSF	FMO	2	358	IPR000960	GO:0050660\|GO:0050661

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Psa5g1452	Psa-Chr5	112170392	112171950	Dispersed/Transposed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Psa5g1452	K11816		-	gmx:100805817	568.926