Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1409 ATGGAGAGTGAAACCGGCTTTGTTCCCAAAGTGACAGAAAACATAGCTATGGATTCTGCAGAGAAGAGACTCAATGAGCTTGGTTACAAGCAAGAACTAAGAAGAGAAATGACTATGTTCAAAACTCTTGCGATATCATTTTCAACAATGACACTTTTCACTGGAATCACACCTTTGTATGGTTCTAGCCTTCAATATGCAGGCCCTGCAAGTCTTGTATGGGGTTGGGTAGTTGTTTGTTTCTTCACTTGGTTTGTTGGAATTGCTATGGCTGAGATATGTTCATCTTTCCCGACAACTGGTTCTCTGTACTTTTGGGCTGCACATTTAGCCGGTCCAAAATGGGGACCATTTTCTTCATGGTGCTGTGCTTGGCTTGAAACTATAGGTCTTATTGCTGGGATTGGGACTCAGGCTTATGCAGGATCACAAACACTGCAGAGTATAATCCTACTCTCAACCGGCACGAATAAAGGTGGAGGATACTTTGCCCCTAAATGGCTATTCTTATGTATGTACATTGGCCTCACTGTTATTTGGGCAGCATTGAACACATTTGCATTAGAAGTTATCGCCTTCATCGATATAATTTCAATATGGTGGCAGGTTATTGGTGGTGCAGTTATTGTGATAATGTTACCTCTGGTGGCACTAACTACACAATCAGCTTCATATGTATTCACAAACTTTGAATTAGCACCTAATACAACAGGAATATCAAGCAAACCGTATGCGGTGATTCTATCGTTTCTAGTGAGCCAATATTCCCTCTATGGATATGATGCTGCAGCGCATCTAACCGAAGAAACTAAAGGCGCAGACAAGAACGGACCGATAGCAATACTAGGTAGTCTTGCCATCATTTCGGTATTTGGTTGGGCTTATATCCTGGCTCTTACATTCAGCATTCAGGATTTCGCCTATCTTTATGATCCAAACAACGAGACTGCTGGAGCATTTGTGCCAGCACAGATATTATATGATGCATTCCATGGAAGATATCACAATTCCACCGGAGCAATAGTTCTACTATTCGTCATTTGGGGTTCATTCTTCTTTGGCGGACTTTCAATCACCACAAGCGCTGCCAGAGTCGTTTATGCACTGTCAAGAGATAATGGAGTGCCGTTTTCGTTCTTATGGCGAAAACTGCACCCAAGACACAAGGTTCCTACAAATGCAGTATGGCTATGTGCAGCAATATGCATTCTTCTTGGTCTACCAATATTGAAGGTGAATGTGGTATTTACTGCTATAACTTCAATATGCACAATTGGTTGGGTTGGTGGTTATGCAGTTCCAATATTTGCAAGAATGGTGATGCCAGAGAAGAATTTCAAGGCTGGACCATTTTATTTGGGAAAGGCAAGAAGGCCAATATGTTTGGTAGCATTTGTATGGATTTGTTACACATGTTGTGTGTTCCTTTTGCCAACTCTTTATCCAATAACTTGGGATACTTTCAATTATGCACCTGTTGCTCTAGGGGTAGGTTTGGGTTTAATAATGGTTTGGTGGGTATTGGATGCAAGAAAATGGTTTAAGGGGCCAGTAAGGAATATTGATGCTCAAAATGGCAAGGTGTAG 1587 0.4152 MESETGFVPKVTENIAMDSAEKRLNELGYKQELRREMTMFKTLAISFSTMTLFTGITPLYGSSLQYAGPASLVWGWVVVCFFTWFVGIAMAEICSSFPTTGSLYFWAAHLAGPKWGPFSSWCCAWLETIGLIAGIGTQAYAGSQTLQSIILLSTGTNKGGGYFAPKWLFLCMYIGLTVIWAALNTFALEVIAFIDIISIWWQVIGGAVIVIMLPLVALTTQSASYVFTNFELAPNTTGISSKPYAVILSFLVSQYSLYGYDAAAHLTEETKGADKNGPIAILGSLAIISVFGWAYILALTFSIQDFAYLYDPNNETAGAFVPAQILYDAFHGRYHNSTGAIVLLFVIWGSFFFGGLSITTSAARVVYALSRDNGVPFSFLWRKLHPRHKVPTNAVWLCAAICILLGLPILKVNVVFTAITSICTIGWVGGYAVPIFARMVMPEKNFKAGPFYLGKARRPICLVAFVWICYTCCVFLLPTLYPITWDTFNYAPVALGVGLGLIMVWWVLDARKWFKGPVRNIDAQNGKV* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1409 528 ProSitePatterns Amino acid permeases signature. 67 98 IPR004840 GO:0006865|GO:0016021|GO:0055085
Psa5g1409 528 Pfam Amino acid permease 39 497 IPR002293 GO:0016020|GO:0022857|GO:0055085
Psa5g1409 528 PANTHER AMINO-ACID PERMEASE BAT1 14 528 - -
Psa5g1409 528 Gene3D Amino acid/polyamine transporter I 32 516 - -
Psa5g1409 528 PANTHER OSJNBB0086G13.12 PROTEIN 14 528 - -
Psa5g1409 528 PIRSF AA_transporter 18 527 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1409 Psa-Chr5 109128820 109131373 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g1409 86 521 Organic Solute Cotransporters AT2G01170 41.972 1.10e-107 327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1409 - - gmx:100815443 999.579
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g1409 5 109128820 109131373 Psa5g1409 5 109128820 109131373 ECH