Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1408 ATGGCTTTCAAAAGTTTCTCTACCCTTTCACACACCACCACTCTCTTCCACAAACTCACTCATGCTTCTCCTTCTTCCCCAATTTCAATCCCCAACTCAACTTCCTCCATCTACATTCAAAATTCCCATAAACACACGCCATGTTTGAGTAAAAGGAAACTCAACCTTACCCTTTTGCTTTCACCCTTTCTATGGAGCGTTTTGCCTAATACACTCTTGTTAGCACAAGAATTATTAACTGCTGACCTTCAGAGATACACTGATTCCAAAGAAGGTTTCACTCTTCTTACACCCTCTTCTTGGACTAAGGTTGATAAAGCTGGGGCTACAGCGTTGTTTCAAGAACCAAATATGGGAAGTAACAATATTGGTGTTGTGGTAAACCCCGTTCGTCTTTCAACTCTTCCAGACTTTGGGACTCCTCAATTTGTTGCTGATAAGCTTTTACAAGCTGAAAGACGCAAGGAAAGTACAAATGAAGCTGAGGTGATTGCAGTTGAAGAAAGATCAGGGAAAGGAGGTTTGCAAGTTTATGAATTTGAATACAAGATTGATAGTACTCGGGGAGGGATGAAGAGGATTTTTACTGCGGCGTTTGTGGCTTCAAGAAAGCTCTATCTTCTAAATATCGTTCACTCTGATAATCCAGAGAGCCCTCTTGATCCGGATAAAAGAATGATGTTAGAGCAAGTTCTTCATTCCTTTGATTCATCTAGTTAA 720 0.4056 MAFKSFSTLSHTTTLFHKLTHASPSSPISIPNSTSSIYIQNSHKHTPCLSKRKLNLTLLLSPFLWSVLPNTLLLAQELLTADLQRYTDSKEGFTLLTPSSWTKVDKAGATALFQEPNMGSNNIGVVVNPVRLSTLPDFGTPQFVADKLLQAERRKESTNEAEVIAVEERSGKGGLQVYEFEYKIDSTRGGMKRIFTAAFVASRKLYLLNIVHSDNPESPLDPDKRMMLEQVLHSFDSSS* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1408 239 PANTHER PSBP DOMAIN-CONTAINING PROTEIN 2, CHLOROPLASTIC 28 237 - -
Psa5g1408 239 Gene3D Mog1/PsbP, alpha/beta/alpha sandwich 75 236 - -
Psa5g1408 239 SUPERFAMILY Mog1p/PsbP-like 83 236 IPR016123 -
Psa5g1408 239 Pfam PsbP 82 236 IPR002683 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Psa5g1408 239 PANTHER - 28 237 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1408 - - cam:101497097 343.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g1408 5 109098177 109100445 Psa5g1408 5 109098177 109100445 ECH