Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1407 ATGTTATTACTTCCAATGTCACCTTCTTCCTCGCTCACCAGCCTTGTATTCGCCAGGAAACTGCTACGAACTCAAAATTGGAACTTACCAACAACAGAAGGGAGATTCATATCATTCAAGGCTTGTGTGAGGTTCGTTCAAACATCGTGTCGAATCTCTGCACCCGGAACCTTCCCAATTGTAAACGATGAAAAACACCACTCTAATAATGTCATAAGGGATAGGAAGGTGGTTCCTGATGCAGATCCTCCTAGTGCCAAAGATGTTGAGCTTTTGTATCAATTTTTTGAAAAAAGTACCAAGCTCATGGTATTGACTGGTGCTGGAATCAGTACAGAGTGTGGTATCCCTGACTATAGAAGCCCTAATGGCGCTTATAGTTCTGGTTTCAGACCAATAACGCACCAGGAGTTTCTTCGTTCAAGCCGAGCCAGGAGGAGATATTGGGCTAGGAGCTATGCTGGGTGGAGAAAATTTACTGCGTCACAGCCATCTGCTGCGCATCGAGCTTTGGCAACATTCGAGAAAGCTGGCCGAATTGATTTTATGATTACCCAAAATGTTGATAGGCTGCATCATAGAGCTGGTAGCAACCCATTAGAATTACATGGGACTGTATACACTGTAATTTGTTTAGATTGTGGATATTCCCTTTGCCGAAGCTTATTTCAGGACCAATTGAAGGTCCTCAATCCAAAGTGGGCAGAAGCAATTGATAGTTTGGACCATGGAAACCCTGGGTCAGACAAAAGCTTTGGAATGAAACAAAGACCGGATGGTGATATTGAGATTGACGAAAAGTTTTGGGAGGAGGATTTTATCATACCAACCTGCCAGAAGTGCAATGGTGTTCTCAAACCTGATGTTGTCTTTTTCGGTGATAATGTTCCAAAGGATAGAGCTGATATGGCAATGGAAGCATCTAGAAGTTGTGATGCTTTTCTTGTCCTAGGTTCGTCTGTGATGACCATGTCTGCTTTTCGACTTGTCAGGGCAGCTCATGAGGCAGGAGCAGCAACTGCAATTGTCAATGTAGGTCTGACCCGTGCTGATGGTTTTGTGCCCTTGAAAATCAATGCACGGCTGGGTGAGATACTGCCAAGGGTACTTGACATGGGATCCATCAGCGTACCTGTTGTGCAATGA 1146 0.4433 MLLLPMSPSSSLTSLVFARKLLRTQNWNLPTTEGRFISFKACVRFVQTSCRISAPGTFPIVNDEKHHSNNVIRDRKVVPDADPPSAKDVELLYQFFEKSTKLMVLTGAGISTECGIPDYRSPNGAYSSGFRPITHQEFLRSSRARRRYWARSYAGWRKFTASQPSAAHRALATFEKAGRIDFMITQNVDRLHHRAGSNPLELHGTVYTVICLDCGYSLCRSLFQDQLKVLNPKWAEAIDSLDHGNPGSDKSFGMKQRPDGDIEIDEKFWEEDFIIPTCQKCNGVLKPDVVFFGDNVPKDRADMAMEASRSCDAFLVLGSSVMTMSAFRLVRAAHEAGAATAIVNVGLTRADGFVPLKINARLGEILPRVLDMGSISVPVVQ* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1407 381 ProSiteProfiles Sirtuin catalytic domain profile. 90 378 IPR026590 -
Psa5g1407 381 Gene3D - 98 364 - -
Psa5g1407 381 PANTHER NAD-DEPENDENT PROTEIN LIPOAMIDASE SIRTUIN-4 67 371 - -
Psa5g1407 381 SUPERFAMILY DHS-like NAD/FAD-binding domain 70 373 IPR029035 -
Psa5g1407 381 Pfam Sir2 family 107 322 IPR003000 GO:0070403
Psa5g1407 381 CDD SIRT4 92 366 - -
Psa5g1407 381 Gene3D SIR2/SIRT2 'Small Domain' 117 295 IPR026591 -
Psa5g1407 381 Hamap NAD-dependent protein deacetylase [cobB]. 83 369 IPR026587 GO:0034979|GO:0051287
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1407 Psa-Chr5 109034998 109041135 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1407 K11414 - gmx:100815194 610.142