Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1369 ATGGAAAAATGGATGTCTTTGGTGATGCTGCTGTTGTTAATATCGTTGAAAACAATAGAACAAAATTTTGTAGTTAAAGCTGCAGAAGAAGTAACATACGATGGAAGATCTCTTATCATCAATGGCCACAGAAATATTCTCTTCTCTGGTTCTATTCATTACCCTCGCAGCACCCCTCAGATGTGGGGAGACTTGATAGCGAAAGCAAAACAAGGAGGATTGGATGTTATCCAAACCTATGTGTTTTGGAATCTTCATGAACCTCAACCCGGCAAGTATGATTTTAGTGGAAGATATGACTTGGTGAGATTCATAAAAGAAATTCAAAGTCAAGGACTGTATGTTTGTCTCAGAATTGGACCCTTCATTGAAAGTGAATGGACATATGGAGGATTCCCATTTTGGCTGCATGATGTCCCTGGCATTGTTTACCGAACAGACAATGAGCCATTTAAGTTCTACATGCAAAATTTTACAACAAAAATTGTCAACATGTTGAAAGAAGAGGGTTTATATGCTTCACAAGGAGGCCCAATTATATTTGTCACAGGTTCGCAGTATGTTGAATGGGCTGCAAAAATGGCAGTAGGCCTTAATACAGGCGTACCGTGGGTTATGTGCAAGCAAACAGATGCTCCTGATCCTGTGATCAACACATGTAATGGTATGAGATGTGGAGAAACTTTTACAGGACCAAACTCTCGTAATAAGCCTGCAATGTGGACAGAGAATTGGACATCATTCTATCAAGTGTATGGTGGATTGCCGTATATACGATCGGCAGAAGACATTGCGTTTCATGTCGCTCTTTTTGTAGCACGAAACGGAAGCTTTATCAATTACTATATGTATCATGGTGGAACAAACTTTGGGAGAACTGCCTCTGCTTATACTATAACAGGTTATTACGATCAAGCACCGCTCGATGAATATGGTTTGTTCAGACAACCGAAGTATGGACATCTCAAGGAGTTGCATGCTGCAATCAAGTCTTGTTCAACCACTTTATTACAAGGAGTGCAGAGGAATTTCTCATTAGGTGAATTGCAGGAAGGTTATGTTTTTGAAGAAGAAAATGGAGGATGTGTTGCATTGCTTATAAACAATGATAAAGGGAACAATGTTACTGTCCAATTTCGCAATAGTTCATATGACTTGCTCCCCAAGTCAATAAGTATCTTACCAGATTGTCAAAACGTGGCTTTCAATACTGCAAATGTAAGTACAACCAGCAACAGAAGGATCATAACTTCAAGACAAAACTTCAGCTCAGTTGATGAATGGCAACAACTTCAAGATGTGATTCCGACTTTCGATGACACTTCGTTAAGATCAAACTCGTTACTCGAGCAAATGAATACAACTAAAGACACTTCGGATTACCTTTGGTATACTCTTAGGTTTGAAAACAATTTATCTTGCAGTGCTCCAATACTTCTTGTTCATTCTGCTGCTCATGTTGCTCATGCTTTTGTGAACAACGAATTCATTGGAGGTGTGCATGGAAACCATGATGCGAAGTCATTTACATTAGAGCTCCCGGTTATACTAAACGAAGGAACAAACAACATTTCTATTCTCAGCGTTATGGTTGGACTTCCGGATTCGGGGGCGTTTCTTGAAAGAAGACTTGCTGGTATAATGAATGTAGAACTTCAGTGCAGTGAAGAAGAGACTCTTAATTTGAACAATTCTACATGGGGATATCAGGTTGGATTACTTGGAGAACAATTAGAAGTATATGATGAACAAAATAGCAGAGACATTAAATGGACTCAACTAGGGGATATCATTGTTGATGAAACTACTCTCACTTGGTACAAGGCAACATTTGACACACCTAAGGGAGATGAGCCTGTTGTGTTAGACCTTAGCTCAATGGGGAAAGGTGAGGTTTGGATAAATGGACAAAGCATTGGTCGGTATTGGATTTTGTTTCATAACTCCAAAGGCAATCCTTCACAATCATTGTATCATGTTCCTCGTTCATTCCTTAAAGACAGTGAAAACAGTTTGGTTTTGTTTGAGGAAGGTGGTGGGAATCCTCTTGGCATATCATTGAGTACTGTTTCAGTCACAGATTTACAAGATGACTTTTCTAAGTTATCACTCCCCACTTTTACTTAA 2127 0.3921 MEKWMSLVMLLLLISLKTIEQNFVVKAAEEVTYDGRSLIINGHRNILFSGSIHYPRSTPQMWGDLIAKAKQGGLDVIQTYVFWNLHEPQPGKYDFSGRYDLVRFIKEIQSQGLYVCLRIGPFIESEWTYGGFPFWLHDVPGIVYRTDNEPFKFYMQNFTTKIVNMLKEEGLYASQGGPIIFVTGSQYVEWAAKMAVGLNTGVPWVMCKQTDAPDPVINTCNGMRCGETFTGPNSRNKPAMWTENWTSFYQVYGGLPYIRSAEDIAFHVALFVARNGSFINYYMYHGGTNFGRTASAYTITGYYDQAPLDEYGLFRQPKYGHLKELHAAIKSCSTTLLQGVQRNFSLGELQEGYVFEEENGGCVALLINNDKGNNVTVQFRNSSYDLLPKSISILPDCQNVAFNTANVSTTSNRRIITSRQNFSSVDEWQQLQDVIPTFDDTSLRSNSLLEQMNTTKDTSDYLWYTLRFENNLSCSAPILLVHSAAHVAHAFVNNEFIGGVHGNHDAKSFTLELPVILNEGTNNISILSVMVGLPDSGAFLERRLAGIMNVELQCSEEETLNLNNSTWGYQVGLLGEQLEVYDEQNSRDIKWTQLGDIIVDETTLTWYKATFDTPKGDEPVVLDLSSMGKGEVWINGQSIGRYWILFHNSKGNPSQSLYHVPRSFLKDSENSLVLFEEGGGNPLGISLSTVSVTDLQDDFSKLSLPTFT* 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1369 708 SUPERFAMILY (Trans)glycosidases 30 332 IPR017853 -
Psa5g1369 708 Gene3D Glycosidases 27 333 - -
Psa5g1369 708 SUPERFAMILY Galactose-binding domain-like 566 692 IPR008979 -
Psa5g1369 708 Gene3D - 426 564 - -
Psa5g1369 708 SUPERFAMILY Galactose-binding domain-like 391 548 IPR008979 -
Psa5g1369 708 Pfam Glycosyl hydrolases family 35 37 328 IPR031330 -
Psa5g1369 708 PANTHER BETA-GALACTOSIDASE RELATED 26 702 IPR001944 GO:0004553|GO:0005975
Psa5g1369 708 Pfam Beta-sandwich domain in beta galactosidase 336 407 IPR041392 -
Psa5g1369 708 Gene3D - 569 699 - -
Psa5g1369 708 PRINTS Glycosyl hydrolase family 35 signature 41 58 IPR001944 GO:0004553|GO:0005975
Psa5g1369 708 PRINTS Glycosyl hydrolase family 35 signature 62 80 IPR001944 GO:0004553|GO:0005975
Psa5g1369 708 PRINTS Glycosyl hydrolase family 35 signature 117 136 IPR001944 GO:0004553|GO:0005975
Psa5g1369 708 PRINTS Glycosyl hydrolase family 35 signature 240 255 IPR001944 GO:0004553|GO:0005975
Psa5g1369 708 PRINTS Glycosyl hydrolase family 35 signature 277 292 IPR001944 GO:0004553|GO:0005975
Psa5g1369 708 PRINTS Glycosyl hydrolase family 35 signature 296 312 IPR001944 GO:0004553|GO:0005975
Psa5g1369 708 PRINTS Glycosyl hydrolase family 35 signature 602 616 IPR001944 GO:0004553|GO:0005975
Psa5g1369 708 PRINTS Glycosyl hydrolase family 35 signature 629 645 IPR001944 GO:0004553|GO:0005975
Psa5g1369 708 PANTHER BETA-GALACTOSIDASE 6 26 702 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1369 Psa-Chr5 107113138 107117754 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g1369 9 693 Glycoside Hydrolase AT5G63800 61.857 0.0 919
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1369 - - gmx:100818637 1207.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g1369 5 107113138 107117754 Psa5g1369 5 107113138 107117754 ECH