Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1353 ATGGGATTCCTTAAGAAAAAGAAAAGTCCTGCCGGAGTCAATGCCGACGAAGTTTACTACGACGGAATCCCACGCTACGTCGAGGTTGACCGCGTCTTTGCCAACTCCGATAGCTCTCTTAAACCTTTTACTATCAACAACCCCGCTGATATCACTGCGCCGCCTTACTTTCCCGAAATCACGGAGACAAATCCGGCCGGAGTCACCGCTGATGAAGTTTTATCCGACGGAATCCCACGCTATGCCGACAAGCTTAGCGCAAAGCAACCTACCGTTGTATCGGAGGTATCGGAGGTGAGTTCACGTTTGGGAAGAGCTAGACCAGGGAAAGTATTGGGTTTTTTGGATAGTATTGGAAGCAGCATGACAAATTTAAGCGCTAGCAGTAAGTTTGTTTCGAGGGATGCAGTTAAGGGGACTAGAATTTCCATCTTAGCATTTGAGGTTGCAAACACTATTATCAAAGGTTATCGACTTATGCAATCTCTTTCCACACAAAATATAAGGCATCTAAAAGAAGAGGTGCTTCTTTCAGAGGCTGTCCATGATTTAGTGTCAAAGGAAAAAGATGAGCTTCTTAGGATTGTTGCCGCAGACAAGTGGCATGAGTTGAAAGTTTTTTCTGAAGAGGTGAGCCGTTTTGGAAATCGTTCAAAGGATCCTCAGTGGCGCAACTTAGACTGTTACTTTGAGAAGATTAGCAAAGAATCAAGTGCTCAAAGACTATCAAGAGACGAAGCAGAATCAATAATGCAAGAACTGATGACTTCGGCCCAATTTACAGTTGAGTTGTACCATAAACTTAACGCGATGACTAGATTTGAACAAGATTTTTGGCATAAGGGTGAAAAGGAGGATCAAAGAGGCGATAATAACCTTGCATTCTTGGAAGCAACAATTAAAAGTCAAAGGAAGCAAATTAAAAATATAAAGAAAAAATCATTCTGGTGTAGAAATATGGAGGAGGTTATTGAGAAGCTTAAAGATATTGTCCATTTTTTACATTTAGAGATACGAAATAACTTTGGGAGTGCAGACCAAAAACCAATAATTGGACACATTGGCAATCGCCAAAGATTGGGCGCCGCTGGTCTTGCGTTGCATTATGCAAATATAGTGCTTCAAATTGATACCCTTGTAGCGAGGTCTCTTTCTATGCTAGCAAATACAAGGGATTCATTGTATCAAAACTTGCCCCCAAATATTAAATCAGCTTTGCGTTCCAAATTACCATCCTATCATGTCATAGAAGAGATGGGAAAGGTAGTTAGTTATATAAGAACATGTTTAGTTAGATCTCCCCGATGGCTGTCGACAACAGTGCTCTTCGGAGCGCCCTCTACTGTCACCCCCGACGAACCTTTACCGGAAACACTCGCGTCTCCTTCGTCCACAGTCAACGACTTACCCAAGCATTTCTCCAACATTGCTATCAAATTAGCATGGTTTGTCGTCACTGAGTTCTGCACCTCGACAAGAGTTGAACGCACCTCTGTGATTTCACTCTCCAAAGCTTCGACCCTAGCTTCCATCTTTGTGAACGCTGCTAACGTCACCTTCTTAGGTGGCATTCACTGGCTCCGTCGTCGGAATCCGGCGGCAAAGCAAATGCTTTATTAA 1620 0.4302 MGFLKKKKSPAGVNADEVYYDGIPRYVEVDRVFANSDSSLKPFTINNPADITAPPYFPEITETNPAGVTADEVLSDGIPRYADKLSAKQPTVVSEVSEVSSRLGRARPGKVLGFLDSIGSSMTNLSASSKFVSRDAVKGTRISILAFEVANTIIKGYRLMQSLSTQNIRHLKEEVLLSEAVHDLVSKEKDELLRIVAADKWHELKVFSEEVSRFGNRSKDPQWRNLDCYFEKISKESSAQRLSRDEAESIMQELMTSAQFTVELYHKLNAMTRFEQDFWHKGEKEDQRGDNNLAFLEATIKSQRKQIKNIKKKSFWCRNMEEVIEKLKDIVHFLHLEIRNNFGSADQKPIIGHIGNRQRLGAAGLALHYANIVLQIDTLVARSLSMLANTRDSLYQNLPPNIKSALRSKLPSYHVIEEMGKVVSYIRTCLVRSPRWLSTTVLFGAPSTVTPDEPLPETLASPSSTVNDLPKHFSNIAIKLAWFVVTEFCTSTRVERTSVISLSKASTLASIFVNAANVTFLGGIHWLRRRNPAAKQMLY* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1353 539 PANTHER DUF668 FAMILY PROTEIN 49 439 - -
Psa5g1353 539 PANTHER OS01G0873900 PROTEIN 49 439 IPR045021 GO:0045927
Psa5g1353 539 Coils Coil 293 313 - -
Psa5g1353 539 Pfam Protein of unknown function (DUF668) 359 432 IPR007700 GO:0045927
Psa5g1353 539 Pfam Domain of unknown function (DUF3475) 144 200 IPR021864 GO:0045927
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1353 Psa-Chr5 105294121 105332492 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1353 - - gmx:100779607 469.159