Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1347 ATGCTAAGCAAAAAACAAGTTTATGCAAATCCATATTCTCATCCCATTACATCACCCAATATTCCCCCCATGAGTTCCTTTCGCAACCCACAAAGAGACGACGAGCCCGGTTCATCCTCAAAGAACCAAATGGGACCAAACTTCCGCTCCCTCTCCACCTGCAACCGAACCGGCCGCACCTCCTCGTCAACCCGCGCAGTTCAACGATCCGCCTCCGCTAGATTGGCTTGTAAAAACTCCTCACGTGAGGTCATGCTTAATGATATCGTCGGTGACGGAATCTCCGGTATCTTGTATAAGTGGGTAAACTACGGTAGAGGGTGGAGGCCGAGGTGGTTTATCCTCCATGACGGTGTTTTATCTTATTACAAAATCCATGGTCCTGATAAACTTATTCTTAACCGCGACGTCGAAAAACGATCAAAAGTGATCGGGGACGAGTCCCTCCGTCGCATCGCTAGCCACCGTCACTGTCCCTCCCGTCGTCAAAATCCTGTCAGTGAAATCCACCTCATGGTGTGTTCGGTGCGTGAAAACAAGTCAGATGAAAGGAGGTTTTGCATATGCACGGGGACGAAGAAGAGAATACATTTAAGAGCGGAGAGTAAAGAAGATAGAACAATGTGGATGGAAGCAATGATGACAGTGAAAAACATGTATCCTCGATTACCTGCCACAACCGATATCATGTCTCCTTCGGCTTCTGTCGTGATTTCGACCGACAAATTGAGACAACGGCTTCTGCAAGAAGGTGTTAATGAAGTTTCTATCCGTGAATGTGAAGATATCATGAGAACGGAGTTGTTTCAATTGCATACATACATTCTTGCCCTTAAAAAGAAACAGATACTACTCACAGACACACTTCGGAATTTAGAAACAGAGAAGGTTGATTTGGAGAACACACTTGTTGACGACCAGAGACAAACTAAAGATGAAGTGGATTCATATCTCTCATCACATGAACATTATAGTGATGGAAGTGGAAGTGAATATTCTGATGAGCACGATAGGGACGATAACACAGATGACGAGAACGATGCATTCTTCGATACATATGAAATTCTTGCAACAAGTTCATTTAAAAGTAATGGATCATCTGATCATTTGAGATCCAACCATGAACCTGAATATGAGGAGGCATCTAGTCCAACAGGAAAATGTGATTCTAAACCGCCTATTGGATCCAACTATCCTTATATCGAGCGACGAAAGAAGTTACCTGATCCCGTTGAGAAAGAAACTGGAGTTAGTTTATGGTCAATAATAAAAGACAATATTGGAAAAGATCTTACAAAAGTTTGTCTTCCAGTTTATTTTAATGAGCCAATCTCTTCATTACAGAAATGTTTTGAAGATTTGGAGTACTCACACCTTCTAGATCAAGCTTATGAATGTGGTAAAATGGGTGACAATCTAATGAGGATACTGTATGTGGCTGCATTTGCAGTTTCAGGGTATGCAAACACTACTGGTAGAAGTTGTAAACCATTTAATCCATTATTGGGTGAAACATATGAAGCTGATTATCCAGATAAAGGCATAAGATTTATATCTGAGAAGGTGAGTCATCATCCTATGATTGTCGCATGTCATTGCGAAGGTCATGGTTGGAAATTTTGGGGCGATAGCAATTTAAAAAGTAAATTTTGGGGTCGTTCGATTCAGCTCGATCCTATTGGTTATTTAACCATCGAGTTTGATGACGGAGAAGTCTTTTATTGGAGCAAGGTATAG 1737 0.4174 MLSKKQVYANPYSHPITSPNIPPMSSFRNPQRDDEPGSSSKNQMGPNFRSLSTCNRTGRTSSSTRAVQRSASARLACKNSSREVMLNDIVGDGISGILYKWVNYGRGWRPRWFILHDGVLSYYKIHGPDKLILNRDVEKRSKVIGDESLRRIASHRHCPSRRQNPVSEIHLMVCSVRENKSDERRFCICTGTKKRIHLRAESKEDRTMWMEAMMTVKNMYPRLPATTDIMSPSASVVISTDKLRQRLLQEGVNEVSIRECEDIMRTELFQLHTYILALKKKQILLTDTLRNLETEKVDLENTLVDDQRQTKDEVDSYLSSHEHYSDGSGSEYSDEHDRDDNTDDENDAFFDTYEILATSSFKSNGSSDHLRSNHEPEYEEASSPTGKCDSKPPIGSNYPYIERRKKLPDPVEKETGVSLWSIIKDNIGKDLTKVCLPVYFNEPISSLQKCFEDLEYSHLLDQAYECGKMGDNLMRILYVAAFAVSGYANTTGRSCKPFNPLLGETYEADYPDKGIRFISEKVSHHPMIVACHCEGHGWKFWGDSNLKSKFWGRSIQLDPIGYLTIEFDDGEVFYWSKV* 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1347 578 Pfam Oxysterol-binding protein 418 578 IPR000648 GO:0008289
Psa5g1347 578 Pfam Pleckstrin homology domain 99 214 - -
Psa5g1347 578 Gene3D - 92 220 IPR011993 -
Psa5g1347 578 MobiDBLite consensus disorder prediction 308 340 - -
Psa5g1347 578 MobiDBLite consensus disorder prediction 10 73 - -
Psa5g1347 578 PANTHER OSBP(OXYSTEROL-BINDING PROTEIN)-RELATED PROTEIN 1C 29 578 - -
Psa5g1347 578 SUPERFAMILY Oxysterol-binding protein-like 413 577 IPR037239 -
Psa5g1347 578 MobiDBLite consensus disorder prediction 368 384 - -
Psa5g1347 578 MobiDBLite consensus disorder prediction 1 73 - -
Psa5g1347 578 Coils Coil 289 309 - -
Psa5g1347 578 MobiDBLite consensus disorder prediction 364 392 - -
Psa5g1347 578 ProSiteProfiles PH domain profile. 91 218 IPR001849 -
Psa5g1347 578 SUPERFAMILY PH domain-like 94 231 - -
Psa5g1347 578 Gene3D - 504 578 - -
Psa5g1347 578 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 29 578 IPR000648 GO:0008289
Psa5g1347 578 SMART PH_update 92 220 IPR001849 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1347 Psa-Chr5 104828824 104832009 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1347 K20456 - gmx:100781218 771.926
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g1347 5 104828824 104832009 Psa5g1347 5 104828824 104832009 ECH