Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1345 ATGAACTTTCCAAATCCAACTCATGCCACGTCATCACCTTCTACTTCTTCCTCCTACACACTCACTCATGCTTCTCCTCATTTCAAGCGCCCTCTGTTGTTGCCGCAGGCAATCTGTACCTCACAAAAAAAGTCATTCTGCTCCGGAGTCCATGCAGAGGCTTATGTTAACTCTAATCCTATGAAAAGTTACATAAAACCCGTGTTCTCGGTGGAAGCTTTAGTAACTGGAACAGCTCAAGATGTTTCTGATACAACTCTTAATGGTGATGACAAGATTGGAGTGTTGTTGCTAAACCTTGGAGGTCCAGAGACTCTAGAAGATGTGCAACCTTTTTTATTTAACCTTTTTGCAGACCCTGATATTATACGATTGCCGAGGATGTTTAGTTTGCTTCAAAAGCCATTGGCCCAGTTTGTATCTGTTCTAAGGGCTCCAAAGAGCAGAGAGGGCTATGCTTCAATTGGCGGCGGTTCTCCACTTCGACGTATAACTGATGCACAGGCGGAAGATTTGAAGAAATCTCTTTCGGCAAAGAATGTCCCCGCCGAAGTGTATGTTGGTATGCGTTACTGGCATCCATTCACCGAGGAAGCTATTGAACAGATTAAAAAAGATGGAATTACAAAGCTGGTCGTTCTCCCACTTTATCCACAATTTTCAATATCAACCAGTGGCTCGAGCTTACGTCTACTGGAGAGCATATTCCGAGAGGATGAGTATCTAGTCAACATGGAGCACACGGTGTTACCTTCATGGTATCAACGTGAAGGATACATAAAGGCCATGTCAAATTTAATCGAAAAAGAGCTGAAGAGTTTTGACTGCCCTAAGGAGGTCATGATATTCTTTAGTGCGCACGGGGTTCCTCTTGCTTATGTGGAAGAAGCCGGTGATCCATACAAAGCAGAAATGGAGGAGTGTGTGGATTTGATCATGGAAGAGCTTGAGACAAGAAAGATAACAAATGCTTACACCCTTGCCTATCAGAGTAGAGTTGGACCTGTGGAATGGTTAAAACCATATACAGACGTGATGATAGTTGAACTTGGAAAAAAGGGAGTGAAAAGTCTGTTGGCTGTTCCAATTAGCTTTGTCAGTGAACATATTGAAACTCTAGAAGAAATTGATGTTGAATACAAAGAATTGGCTCTAGAATCTGGTATAGAAAAATGGGGCCGTGTTCCTGCTCTAGGATGTGAACCTTCCTTCATTTCTGATTTGGCAGATGCCGTGATTGAAAGTCTCCCATATGTTGGTGCCATGGCAGTTTCAAACGTCAATGCTCGACAGTCTTTGGTTCCGCTCGGCAGCGTAGAGGAGTTATTGGCAACATATGACTCGCAACACAGGGAGTTGCCATCACCGGTGATAGTGTGGCAATGGGGTTTGACAAAAAGTGCTGAAACTTGGAATGGAAGAGTAGCCATGCTAGCTGTGCTGCTGCTTTTGTTTTTTGAAGTCACTACACCTGATAGTGTTTTTCACCAGTGGGGAATATTAATGTCCTCTCTTAGGTGA 1521 0.4346 MNFPNPTHATSSPSTSSSYTLTHASPHFKRPLLLPQAICTSQKKSFCSGVHAEAYVNSNPMKSYIKPVFSVEALVTGTAQDVSDTTLNGDDKIGVLLLNLGGPETLEDVQPFLFNLFADPDIIRLPRMFSLLQKPLAQFVSVLRAPKSREGYASIGGGSPLRRITDAQAEDLKKSLSAKNVPAEVYVGMRYWHPFTEEAIEQIKKDGITKLVVLPLYPQFSISTSGSSLRLLESIFREDEYLVNMEHTVLPSWYQREGYIKAMSNLIEKELKSFDCPKEVMIFFSAHGVPLAYVEEAGDPYKAEMEECVDLIMEELETRKITNAYTLAYQSRVGPVEWLKPYTDVMIVELGKKGVKSLLAVPISFVSEHIETLEEIDVEYKELALESGIEKWGRVPALGCEPSFISDLADAVIESLPYVGAMAVSNVNARQSLVPLGSVEELLATYDSQHRELPSPVIVWQWGLTKSAETWNGRVAMLAVLLLLFFEVTTPDSVFHQWGILMSSLR* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1345 506 ProSitePatterns Ferrochelatase signature. 282 303 IPR019772 GO:0004325|GO:0006783
Psa5g1345 506 SUPERFAMILY Chlorophyll a-b binding protein 460 501 - -
Psa5g1345 506 SUPERFAMILY Chelatase 91 422 - -
Psa5g1345 506 CDD Ferrochelatase_C 261 399 IPR033644 -
Psa5g1345 506 Hamap Coproporphyrin III ferrochelatase [cpfC]. 91 416 IPR001015 GO:0004325|GO:0006783
Psa5g1345 506 Gene3D - 254 397 - -
Psa5g1345 506 Gene3D - 92 415 - -
Psa5g1345 506 PANTHER FERROCHELATASE-1, CHLOROPLASTIC/MITOCHONDRIAL 42 427 - -
Psa5g1345 506 TIGRFAM hemH: ferrochelatase 91 416 IPR001015 GO:0004325|GO:0006783
Psa5g1345 506 CDD Ferrochelatase_N 93 255 IPR033659 -
Psa5g1345 506 Pfam Ferrochelatase 92 415 IPR001015 GO:0004325|GO:0006783
Psa5g1345 506 PANTHER FERROCHELATASE 42 427 IPR001015 GO:0004325|GO:0006783
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1345 Psa-Chr5 104809053 104812670 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1345 K01772 - gmx:100803481 817.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g1345 5 104809053 104812670 Psa5g1345 5 104809053 104812670 ECH