Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1344 ATGAAAGCTTCTTCTAACAAGTGTTTCTCTTCTCAAGTTTTGCCTCTCTTCTTCACACTAGCATTTACTACACTAATTCATGTTTCTTGTTGGACTCATTCTCCACATTTCTCATCATTTCTTGTTTCAAAACATGAAGATGAAGAAGCTCCATCATCATCCAGTTCATTTCCATTACAAACCTTTGCTTCATATGGTTCTCATGATGATGAAAAGCTTGACACAAACTTTAAGCATAAAGTCACAAAGAAAGAGAACCTTAGAGACCATAAATACAGCAATTTGGAAAAAATTGAATCAAAATTGGCTAAAGCAAGGTATTCCATCAAAGAAGCTAGCAAAGTTCAAAATTTGACATATACCCACCAATATCAAGAATATGTTCCTCATGGCTCAATTTACAGAAACGCCAACGCTTTCCATCGGAGTTACCTAGAGATGGAAAAGGTGTTCAAGATTTTCGTGTACGAAGAAGGAGAGCCGCCAATGTTTCACCATGGTTTAAGCAAAAACATATACTCAACAGAAGGAATGTTCATAAACGAAATGGAAAAGGGAAGATACTACAGAACAAATGATCCAAATGAAGCTTCTGTGTATTTTCTTCCTTTCAGTGTGGTTATGATGATTGAATATCTCTACGTGCAAGGCACCTATGATCGAACTTCGATCGGTCTTTGTGTAAAAGACTATATACAGATTATATCTCATAAGTATCCATTCTGGAATCAATCTCAAGGCCATGATCATTTCATGCTCTCTTGCCATGATTGGGGTCCAGTTGTATCCGCTTACGTCGATAACTTGTTCAACAATTCAATAAGAGTACTCTGCAATGCTAATACATCAGAAGGATTCAAACCAGAAAAAGATGTACCATTCCCTGAAATGAATCTCAAGACAGGAGATCTCACAAATCTAGTAGTACAAGGGTACCCTATATCTCATAGGACAATCCTTGCTTTCTTTGCAGGTCATTTGCATGGTAATATAAGATACTTACTCCTCAATACATGGAAAAACAAAGACGAAGATGTTCAAGTTTTCAATGAACTTCCTGACGAAGAATCCTATCACACAAAGCTTAGAAGCAGCAAGTTTTGTTTGTGTCCTAGTGGTTATGAGGTGGCGAGTCCGAGAATTGTGGAAGCTATATTTGCAGAATGTGTGCCTGTGTTGATTTCTGATAGCTATGTTCCGCCTTTTAGTGATGTTTTGAATTGGAAATCGTTTTCGGTTCAAATAGATGTGAAGGAAATTCCTAATATTAAGAAGATACTCATGGGAATTTCACAGAGACAGTACTTGAAAATGCAGAGGAGAGTGAAACAAGTTCAAAGGCATTTTGTTCCTAATGAGCCACCAAAGAGGTTCGATATTTTCCATATGACTATTCATTCTATTTGGCTTAGAAGGTTGAACATCCGTATTCGTGGTGATGATCACTAA 1449 0.3706 MKASSNKCFSSQVLPLFFTLAFTTLIHVSCWTHSPHFSSFLVSKHEDEEAPSSSSSFPLQTFASYGSHDDEKLDTNFKHKVTKKENLRDHKYSNLEKIESKLAKARYSIKEASKVQNLTYTHQYQEYVPHGSIYRNANAFHRSYLEMEKVFKIFVYEEGEPPMFHHGLSKNIYSTEGMFINEMEKGRYYRTNDPNEASVYFLPFSVVMMIEYLYVQGTYDRTSIGLCVKDYIQIISHKYPFWNQSQGHDHFMLSCHDWGPVVSAYVDNLFNNSIRVLCNANTSEGFKPEKDVPFPEMNLKTGDLTNLVVQGYPISHRTILAFFAGHLHGNIRYLLLNTWKNKDEDVQVFNELPDEESYHTKLRSSKFCLCPSGYEVASPRIVEAIFAECVPVLISDSYVPPFSDVLNWKSFSVQIDVKEIPNIKKILMGISQRQYLKMQRRVKQVQRHFVPNEPPKRFDIFHMTIHSIWLRRLNIRIRGDDH* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1344 482 Coils Coil 95 115 - -
Psa5g1344 482 Pfam Exostosin family 148 428 IPR040911 -
Psa5g1344 482 PANTHER OS07G0188700 PROTEIN 77 477 - -
Psa5g1344 482 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 77 477 IPR004263 GO:0006486|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1344 Psa-Chr5 104804378 104806127 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1344 - - aprc:113868893 692.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g0908 7 68859736 68863197 Psa5g1344 5 104804378 104806127 PCT