Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1334 ATGGCGACGCCAACGGCAGTAGTTGATGGCGGAGGTGCTGCACCGGCACCGCAAGGGAGGCAACAAGGCGGCGGAGGCTTTAGTTTCACCGGAATCATTCGTATGGTTGTTTTCTGGTATTTCGCTTCCAAATTCTTTTCTCCTGCTAAAAAACCTACCGAACCTTCCGCTCTCGTCTCTAACCTCTTCCAAAAAGGCCAGCCTATGGATATGTGGCTTTATCTTACTGAGAACGAGAAGTTCAATGAATTTGGTAGTGAAAGTGCTCTTGTATGGCATGAAACTAATATTCCCTACGCCGTGTGGGTACCTGAGAGTACCAGAACTCTTACTTTAAACTTTCCCCCAACTGAGTCTTTGAAGCACAATGGGAGTCTATATGCTCATGTTTTCTTTGCACAATCTGGATATTCGCCTGACCCTAGTGATCCCGAATACCAGCCTCAAGCAGCATTTGGAAGGACGCTTCCTGTTGTGGTATACTCGCCAAAGTCAAAAGCAGATAAAAAGAAGAGTCTGTTGGGAGGTGTACCGGATTCAAGTGAGAGTCAAGTAACACCCGAGGTCGTTGATGATAGTGAAGATGATTCTAAAGATGATGGTCCTGTGGAGTGGCTTGCATATTGGAAACCAAATATAACAATTAACTTGATTGCCGACTTCACTCAGTACCCAAATACAGGAATACCACCTAACATTGCTCCACACTTGAACATTGATCCTATCACTGGGAACTACTATCCAACCATTTACTTCAATGAGTTCTGGTTACTGCGGGATAAGTTAATAGCTTTGAATGAGACAGTTACTGAACTGACACTTAATCTGGAAGTTGGTCCTATTAGCATGACGAAGTGGCAATTATTCATGCAAGTTGATCAGTCCTTCCAGATTCACCGTAGTTACGGAAGCATGATTGAAGGCGAGGCTGATGAACTTAAGAGGGTATTCTTGGAAGGAAATCCTTACCTCCTAGGAATTACCATGGTTGTTTCTCTTCTTCATTCAGTATTTGACTTTCTGGCTTTTAAGAATGACATTCAATTTTGGAACAAAAATAAGTCCATGGAAGGACTCTCTGCGAAGACTGTTGTTGTGAGCTTTATTTGTCAGCTCATCATCTTCCTTTATTTGCTTGACAACGACACATCTTGGATGATTCTTCTAAGCTCTGGAGTTGGTTTGATTATCGAGTTCTGGAAAATTGGAAAAGCCATGCACATAGAGATTGATAGAACAGGAAGGATACCTATGTTGAGGTTCCGAGATCGAGAGTCATATGCCGGGAATAAGACAAAAGAGTATGATGATATTGCAATGAAGTATTTAACATATGTTCTATTTCTCCTTGCTGCCGGCTTTGCTGCTTACTCACTAATGTACGAACGCCACAAGAGTTGGTATTCTTGGATTCTGTCTTCACTCACAAGTTGTGTATACATGTTTGGTTTTATTATGATGTGCCCTCAACTGTTCATCAACTACAAGCTCAAATCTGTTGCTCACCTACCTTGGAGGCAGATGACTTACAAGTTTCTCAACACCATCATTGATGATCTTTTTGCCTTCGTCATTAAAATGCCAACTCTACATCGGCTTTCTGTCTTCCGTGATGATCTTATCTTCCTTATATATGTATACCAGAGGTGGATTTATCCAGTGGATAAGAAGCGTGTTAATGAATTTGGTTTTGGAGGTGAGGATGAACAGGCTATCGATTCTGCCGAGACGGTCGCAGTAAAGGAAGAAGAGAAGAAAACTAATTGA 1767 0.4205 MATPTAVVDGGGAAPAPQGRQQGGGGFSFTGIIRMVVFWYFASKFFSPAKKPTEPSALVSNLFQKGQPMDMWLYLTENEKFNEFGSESALVWHETNIPYAVWVPESTRTLTLNFPPTESLKHNGSLYAHVFFAQSGYSPDPSDPEYQPQAAFGRTLPVVVYSPKSKADKKKSLLGGVPDSSESQVTPEVVDDSEDDSKDDGPVEWLAYWKPNITINLIADFTQYPNTGIPPNIAPHLNIDPITGNYYPTIYFNEFWLLRDKLIALNETVTELTLNLEVGPISMTKWQLFMQVDQSFQIHRSYGSMIEGEADELKRVFLEGNPYLLGITMVVSLLHSVFDFLAFKNDIQFWNKNKSMEGLSAKTVVVSFICQLIIFLYLLDNDTSWMILLSSGVGLIIEFWKIGKAMHIEIDRTGRIPMLRFRDRESYAGNKTKEYDDIAMKYLTYVLFLLAAGFAAYSLMYERHKSWYSWILSSLTSCVYMFGFIMMCPQLFINYKLKSVAHLPWRQMTYKFLNTIIDDLFAFVIKMPTLHRLSVFRDDLIFLIYVYQRWIYPVDKKRVNEFGFGGEDEQAIDSAETVAVKEEEKKTN* 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1334 588 MobiDBLite consensus disorder prediction 170 198 - -
Psa5g1334 588 PANTHER BNAA09G05230D PROTEIN 8 588 - -
Psa5g1334 588 Pfam Cleft lip and palate transmembrane protein 1 (CLPTM1) 31 461 IPR008429 GO:0016021
Psa5g1334 588 MobiDBLite consensus disorder prediction 1 21 - -
Psa5g1334 588 PANTHER CLEFT LIP AND PALATE ASSOCIATED TRANSMEMBRANE PROTEIN-RELATED 8 588 IPR008429 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1334 Psa-Chr5 104465850 104474996 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1334 - - gmx:100804885 991.875