Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1243 ATGGCCCTTCAACGCGATTCTTGGGTTTTTGTTTTCGGTCTACTAGGCAATATCATCTCCGTTATGGTCTTTCTTGCTCCATTACCAACATTTTACCAAATCTACAAGAAGAAATCTACTCAAGGGTTTCAATCAGTCCCTTATATTGTTGCATTGCTTAGTGCAATGCTTTGGATTTATTATGCAATTGTCAAAAGGGAACATAGCCTCCTTCTCCTCACAATTAACTCATTTGGACTTGTGGTGGAATCAATTTACCTTGCAATTTTCCTAGTTTATGCATCAAATAAAGCCAGGCTTTCAACCTTCAAGCTTATTCTACTATTAAATGTGTTTGGATTTGGAGCAATGCTTGTTTCAACCCTATGCCTAACAATGGGATCCAAACGTCTTTCTGTTATTGGATGGATTTGTCTTGTTTTCAACATAACAGTATTTGCTTCTCCTCTATGCATTATTAGACACGTAATAAAGACTAAAAGTGTTGCATACATGCCACTTAGTTTGTCCTTCTTTTTGAGCTTAAATGCTATCATGTGGTTTTTCTATGGTTTTCTCATCAGAGATTATTACATTGCTCTTCCAAATACGCTTGGGTTTGTATTCGGTATAGTTCAGATGGTGATGTATTTGATTTATAGAAACTCAACCCAAGTGATGGTACCAGAAAAGTCAACGAAGTTACAAGAACAAAATGGCCATATTATTGACATTGTGAAGATCATTGACACAAATCAAGGTGACAATAGTGGTGCTCTACCTGTATCAACTATTTGTGAGGATCCAAATAGTGGAAAATAA 801 0.362 MALQRDSWVFVFGLLGNIISVMVFLAPLPTFYQIYKKKSTQGFQSVPYIVALLSAMLWIYYAIVKREHSLLLLTINSFGLVVESIYLAIFLVYASNKARLSTFKLILLLNVFGFGAMLVSTLCLTMGSKRLSVIGWICLVFNITVFASPLCIIRHVIKTKSVAYMPLSLSFFLSLNAIMWFFYGFLIRDYYIALPNTLGFVFGIVQMVMYLIYRNSTQVMVPEKSTKLQEQNGHIIDIVKIIDTNQGDNSGALPVSTICEDPNSGK* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1243 266 Gene3D - 10 99 - -
Psa5g1243 266 Gene3D - 128 226 - -
Psa5g1243 266 PANTHER RAG1-ACTIVATING PROTEIN 1 5 245 - -
Psa5g1243 266 Pfam Sugar efflux transporter for intercellular exchange 11 97 IPR004316 GO:0016021
Psa5g1243 266 Pfam Sugar efflux transporter for intercellular exchange 133 217 IPR004316 GO:0016021
Psa5g1243 266 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET 5 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1243 Psa-Chr5 96043709 96046075 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g1243 1 241 Miscellaneous Gene Families AT5G50800 52.697 6.36e-89 264
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1243 K15382 - gmx:100810962 373.244
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g0872 7 64195324 64197406 Psa5g1243 5 96043709 96046075 PCT