Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1222 ATGGCATCAATAAGCAACATTGGTTTACATGGGAATTGGAATCTGAGCAATGCAAAGAAGGAAAATGTGATCTACACAGGAAATCTTAGATTTAATTATTTTCATCATCACAACAACAAACGAAGATTTTCACCGGTGATTACAGGTTGTAACCATGGAAGTACTTATAATAAAGTGGACACAATTAATGGAACAAAAGTGAATGGTTTACAAGTGGCAGAGGCTCCAGGAAAATTGAGAAATGAAAATACAACAGATGTTGGTCTTGTTACAAATGGAAAATTGGTTGAAGGAAGGTTTGTGTTTAGACAGATTTTTGTTATTAGATCCTATGAAATTGGTCCAGATCGCACTCTCACCATGGAGACACTCATGAATTTTCTTCAGGAAACTGCTCTAAATCATGTTACAAGCTCTGGGATAGGAGGAGATGGATTTGGAGCTACGCGTGAGATGAGTCTAAGGAAACTCATTTGGGTTGTTACTCGAATTCAGGTTCAAGTGCAGAGATATAACAAATGGGGAGAAGAAATTGAAGTTGATACCTGGGTCGATGCCGCAGGAAATAATGGAATGCGAAGAGATTGGATAATCAGAGATCGATGTACGGGAGAGATCATAACTAAAGCAACAAGCACATGGGTGATAATGAATAGAGAAACTAGAAGATTATCGAAAATACCTGAAGAAGTTAAAAGAGAGCTTTCTCCTTTTTACATTCATAGGATTGCTGTAGCTAGTGAAGAAAGAGACTGTGAAAAGATAGACAAACTCACTGATGAAACTGCTGAGACAACACGTTCTGGTTTGGCTCCAAGGTGGAATGACATGGATGTTAACCAGCATGTAAACAATGTGAAATACATCGGATGGATATTAGAGAGTGTGCCGATGAAAGTTCTAGAAGATTATAAAATGAAAAGCTTGACTTTAGAGTATAGGCGTGAATGTACACAATCAAATACGTTGGAATCTATGACATGTCCAACAGAAAGAGTGATAGGTGAATCTGATAATAATTCCAGCAACAGAAAACCTGATCTGCAATACACACACTTACTTCGTTTACAAGATGATAAAAAAGAAGTTGTTCGAGCTAGATCTGAATGGCATTTAAAGCAAAATCAGCAATGA 1134 0.373 MASISNIGLHGNWNLSNAKKENVIYTGNLRFNYFHHHNNKRRFSPVITGCNHGSTYNKVDTINGTKVNGLQVAEAPGKLRNENTTDVGLVTNGKLVEGRFVFRQIFVIRSYEIGPDRTLTMETLMNFLQETALNHVTSSGIGGDGFGATREMSLRKLIWVVTRIQVQVQRYNKWGEEIEVDTWVDAAGNNGMRRDWIIRDRCTGEIITKATSTWVIMNRETRRLSKIPEEVKRELSPFYIHRIAVASEERDCEKIDKLTDETAETTRSGLAPRWNDMDVNQHVNNVKYIGWILESVPMKVLEDYKMKSLTLEYRRECTQSNTLESMTCPTERVIGESDNNSSNRKPDLQYTHLLRLQDDKKEVVRARSEWHLKQNQQ* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1222 377 PANTHER ACYL-[ACYL-CARRIER-PROTEIN] HYDROLASE 35 376 - -
Psa5g1222 377 MobiDBLite consensus disorder prediction 330 349 - -
Psa5g1222 377 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 100 245 IPR029069 -
Psa5g1222 377 Gene3D Hotdog Thioesterase 93 376 - -
Psa5g1222 377 MobiDBLite consensus disorder prediction 330 348 - -
Psa5g1222 377 Pfam Acyl-ACP thioesterase 101 371 IPR002864 GO:0006633|GO:0016790
Psa5g1222 377 CDD 4HBT 102 218 - -
Psa5g1222 377 PANTHER OLEOYL-ACYL CARRIER PROTEIN THIOESTERASE 1, CHLOROPLASTIC 35 376 IPR045023 GO:0006633|GO:0016297
Psa5g1222 377 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 257 371 IPR029069 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1222 Psa-Chr5 95132734 95135120 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g1222 93 373 Acyl Lipid Metabolism Gene Families AT1G08510 56.584 2.38e-109 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1222 K10781 - gmx:100791281 538.88