Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1203 ATGGCCGCCGCCGCCGCCGCCACCACCACCACCACTTCCAGATCTCCGTTCACTTCATCTTCTTCGTATTCCACTTTCCTTAAACGAAACTCCAAACTCACATTCCCTTTCTCTCCCATTTTCAACAAGCCACAGTCCATTCACACTCGTCCCCTCACTATCTCATCCTCCCTCTCCAACTCCCCCGCCGCACCACCTTCCACCACCACCACCACGACCTCCGATGATCAATACATCTCTCGTTTCTCCTCCACCGAGCCAAGAAAAGGAGCCGACATTCTCGTCGAAGCTCTCGAGCGTCAAGGCGTCACCAACGTATTCGCTTACCCCGGCGGAGCTTCCATGGAGATCCACCAAGCTCTTACACGCTCTAGAACAATCCGAAACATACTTCCCCGCCACGAACAAGGTGGAGTCTTTGCCGCCGAAGGCTACGCACGCTCCTCCGGTCTCCCCGGTGTCTGCATCGCCACTTCCGGTCCCGGTGCCACCAACTTAGTCAGCGGACTTGCTGATGCTTTGATGGACAGTGTCCCTCTCATAGCCATTACCGGTCAAGTTCCCCGGAGGATGATTGGAACCGATGCTTTTCAAGAAACCCCAATCGTTGAAGTAACGAGATCCATCACAAAGCATAACTACCTCATTCTCGATGTTGATGACATTCCTAGGGTTGTGAAAGAGGCTTTTTTTCTTGCAACTTCAGGCAGGCCCGGCCCGGTTCTCATCGACCTACCCAAAGACATTCAACAACAGTTAGCAGTTCCTAATTGGGCCGAGCCCATCAGGCTCACTGGGTATGTTTCCAGGTTACCCAAAATTCCTAGCGAGGCCCAACTTGAACAGGTTCTGAGGTTGTTATTAGAATCTAAAAAACCAGTTTTGTATGTTGGAGGTGGATGTTTGAATTCCAGTGAGGAATTGAACCGGTTTGTTGAACTGACCGGTATTCCTGTTGCTAGTACTTTAATGGGACTTGGTAGTTACCCTATTGGAGCTGAACATTCCCTTCACATGTTGGGCATGCATGGTACTGTTTATGCTAATTATGCTGTTGATAGTAGTGATCTGTTGCTTGCTTTCGGGGTTAGGTTTGACGATCGTGTAACCGGAAAGTTAGAAGCGTTTGCTAGTAGGGCTAAGATTGTTCATATAGATATTGATTCTGCTGAGATTGGGAAGAATAAGATTCCACATTTGTCGATCTGTGCTGATATGAAGGTGGCATTGGAAGGTCTTAATAGGGTTTTGGAGAGTAAAGGAGTTAAGGGTAAACTTGATTTTGAAGCATGGAGGCAGGAGTTGAATGTTCAGAAATTGAAATTTCCTCTTGGGTTTAAGACGTTTGAGAATGCGATTTCTCCGCAGTATGCTATTCAGGTACTTGATGAATTGACTAATGGAGATGCTATTATTAGTACTGGTGTTGGACAGCATCAAATGTGGGCTGCTCAGTTTTATGAGTATAAGAGACCTAGGCAGTGGTTAACTTCCGGTGGACTTGGTGCTATGGGTTTTGGATTACCAGCTGCTATTGGTGCTGCTGTTGCTAACCCTGATGCGATCGTTGTTGATATTGATGGGGATGGTAGCTTTATCATGAATGTTCAAGAGTTGGCTACTATAAGAGTGGAGAATCTTCCAATTAAGATATTGTTGTTGAATAATCAACATTTGGGTATGGTTGTTCAATGGGAGGATAGATTCTATAAGTCAAATAGAGGTCATACTTATCTTGGTGACCCTTCTAAGGAGGATGAGATTTTCCCTAACATGCTTGGATTTGCTGATGCTTGTGGAATACCGGCGGCTCGTGTGACCAAAAAGGAAGAGCTTCGAGAAGCTATTCAGAAAATGTTGGACACTCCTGGCCCTTATCTTCTTGATGTCATTACACCTCATCAAGAACATGTATTGCCAATGATTCCAAGTAATGGATCTTTCAAGGATGTGATCACGGAGGGTGATGGCAGAACGAGCTACTGA 1986 0.4632 MAAAAAATTTTTSRSPFTSSSSYSTFLKRNSKLTFPFSPIFNKPQSIHTRPLTISSSLSNSPAAPPSTTTTTTSDDQYISRFSSTEPRKGADILVEALERQGVTNVFAYPGGASMEIHQALTRSRTIRNILPRHEQGGVFAAEGYARSSGLPGVCIATSGPGATNLVSGLADALMDSVPLIAITGQVPRRMIGTDAFQETPIVEVTRSITKHNYLILDVDDIPRVVKEAFFLATSGRPGPVLIDLPKDIQQQLAVPNWAEPIRLTGYVSRLPKIPSEAQLEQVLRLLLESKKPVLYVGGGCLNSSEELNRFVELTGIPVASTLMGLGSYPIGAEHSLHMLGMHGTVYANYAVDSSDLLLAFGVRFDDRVTGKLEAFASRAKIVHIDIDSAEIGKNKIPHLSICADMKVALEGLNRVLESKGVKGKLDFEAWRQELNVQKLKFPLGFKTFENAISPQYAIQVLDELTNGDAIISTGVGQHQMWAAQFYEYKRPRQWLTSGGLGAMGFGLPAAIGAAVANPDAIVVDIDGDGSFIMNVQELATIRVENLPIKILLLNNQHLGMVVQWEDRFYKSNRGHTYLGDPSKEDEIFPNMLGFADACGIPAARVTKKEELREAIQKMLDTPGPYLLDVITPHQEHVLPMIPSNGSFKDVITEGDGRTSY* 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1203 661 ProSitePatterns Thiamine pyrophosphate enzymes signature. 512 531 IPR000399 GO:0000287|GO:0030976
Psa5g1203 661 PANTHER THIAMINE PYROPHOSPHATE ENZYMES 62 660 IPR045229 -
Psa5g1203 661 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 83 264 IPR029061 -
Psa5g1203 661 MobiDBLite consensus disorder prediction 55 76 - -
Psa5g1203 661 Pfam Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 475 630 IPR011766 GO:0003824|GO:0030976
Psa5g1203 661 Gene3D - 280 444 - -
Psa5g1203 661 PANTHER ACETOLACTATE SYNTHASE 62 660 - -
Psa5g1203 661 Pfam Thiamine pyrophosphate enzyme, central domain 281 413 IPR012000 GO:0000287|GO:0030976
Psa5g1203 661 CDD TPP_PYR_POX_like 92 247 - -
Psa5g1203 661 Pfam Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 89 252 IPR012001 GO:0030976
Psa5g1203 661 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 453 652 IPR029061 -
Psa5g1203 661 SUPERFAMILY DHS-like NAD/FAD-binding domain 277 443 IPR029035 -
Psa5g1203 661 TIGRFAM acolac_lg: acetolactate synthase, large subunit, biosynthetic type 89 653 IPR012846 GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660
Psa5g1203 661 CDD TPP_AHAS 453 644 IPR039368 GO:0030976
Psa5g1203 661 Gene3D - 77 271 - -
Psa5g1203 661 Gene3D - 445 631 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1203 Psa-Chr5 94297617 94299602 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1203 K01652 - gmx:100782250 1048.88