Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1175 ATGGGAGATTCTCCTCATAACAGAAACTTGATCAAACAACACCAGCTTCGTATATACGAACAATCACAATCGTACCTTCGTGAACAGAACCTTTCACTACTCCGCAAATTGAATCAGAAAGAGAAACTCCTTCAACGCCACAAGTCTGAACCGGATATGAATGCACGAGCTTTGAAGAAGTTTGAATTGGAGAATCAGAAACTTGCTTCCGCGTGTCAGGAATTGTTGGATAAAGGGAATAATTTGGAAAAGGAAATTGCTTTGTATGAACATGATAGGGAAGCGTTGATGGAATTTGGGAATGAAGCTGATGAACGGGAACAACAGGCGAGATCCAGTGTTTTGGAATTGGAAAGGAATTTGCAATTGGTTATGGATGAATTGAAAAATTATAAGCATCAAAAGGATTTAAAGGCCGGTTCTTCTTCTACCTGCACAGCTGTGGAAAAGAATTTACTTGACTCTCTTTTGGAAACACTTCCTAGTAAAGATGATGATTCTACACATGCATTTTTGAAAGCAAATCTTGAAAATGAGTCATGTAAAAGGCTGCTGAGCATGTGGAACTGCCTAAAGCCATCAACTCATAGAGTTTTGTCTCTAGTTTCCAAAATCAAGTCACTTCAAAAAGATAAGGAGCATCTAAGAATTAACCTTCACAAAGCTGAGGAGGAGGTCAAATTACTGTTTGATGAAAACAGCATATTGGACAAGGAGAACAAACGGCTATTGAAGAAATACAAGGAAAGGAACCACCCTAGTTCTGGCGAGAAACATACCAGTAGCCAGTCTGCCAAGTCAAACAAGAGAAAGTCTAGTCCGAGAACAAATAGCCCAGTGGAGCAGAAAGTTAGGAACGACTCTAATTCGAGCGAGAAACATACTACCAGCCCATCTGCCAAGGCGAGTTAA 912 0.4013 MGDSPHNRNLIKQHQLRIYEQSQSYLREQNLSLLRKLNQKEKLLQRHKSEPDMNARALKKFELENQKLASACQELLDKGNNLEKEIALYEHDREALMEFGNEADEREQQARSSVLELERNLQLVMDELKNYKHQKDLKAGSSSTCTAVEKNLLDSLLETLPSKDDDSTHAFLKANLENESCKRLLSMWNCLKPSTHRVLSLVSKIKSLQKDKEHLRINLHKAEEEVKLLFDENSILDKENKRLLKKYKERNHPSSGEKHTSSQSAKSNKRKSSPRTNSPVEQKVRNDSNSSEKHTTSPSAKAS* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1175 303 Coils Coil 114 134 - -
Psa5g1175 303 PANTHER PLANT PROTEIN MATCH IS: (TAIR:PLANT.1) PROTEIN, PUTATIVE-RELATED 13 300 - -
Psa5g1175 303 PANTHER EARLY ENDOSOME ANTIGEN 13 300 - -
Psa5g1175 303 Coils Coil 30 50 - -
Psa5g1175 303 Coils Coil 205 239 - -
Psa5g1175 303 Coils Coil 58 92 - -
Psa5g1175 303 MobiDBLite consensus disorder prediction 244 303 - -
Psa5g1175 303 MobiDBLite consensus disorder prediction 257 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1175 Psa-Chr5 92070613 92074036 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1175 - - cam:101495890 442.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g1175 5 92070613 92074036 Psa5g1175 5 92070613 92074036 ECH
Psa2g1607 2 126702105 126706021 Psa5g1175 5 92070613 92074036 PCT