Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1155 ATGGACACCAAAGAGAAACACGCGATGATCCGCGACATCGGTTTACAAATAGTTATGATACTTGCAATGATCTTAATCTTCCTCAGCATGCACGGTATTCCCCAGAAATTTCTCGCTAAACTCCGAATCCGCAACCGAACCGGTATCAAAGCCAAGCGTCACTTCGTTAGAGGCGCTCAGCTTCTCACACAAGCGAGATCTTCCAAAAACAAATCCAGATCCGCCATCAACAACCTCGCCAACGAGGCCCTAGCCGAAGCCGAAAAAGCAATCGAACTCGATCCTAAAGACGCCGCTTCGTATCTTCTCAAAGCTATGGTTCTAGATCTTCAGGGTTTTAGAACCTCCGCTCTTGAATCGCTCGACGCGGCGTTGTCTCCTCTCGCTGCTGGTTCTCTTGCTGAGGGAGAACGTGGTGACGCGTTGTTTAAGAGAGCTGAGCTGAAACTCGCGACGAGTGAACGCGGACGAGTTGACTCGGCGCTTGCGGATTTGACTGAGTCGGTGATTTTGAGTCCGAAGAACGCGAAGGCTTGGTGTGCGTTAGGGGAGTGCTATGAAGGGAAGAAAATGGAGGTGGAAGCTAAGAAAGCGTACAAGGAGGCTCTTGAGTTGGAGCCACAGTTTTCTGTGCCGGTAGAAGCACTTAACAGCAATGGGGAAAAAGATGCAGTGTCGTCTTGA 684 0.5015 MDTKEKHAMIRDIGLQIVMILAMILIFLSMHGIPQKFLAKLRIRNRTGIKAKRHFVRGAQLLTQARSSKNKSRSAINNLANEALAEAEKAIELDPKDAASYLLKAMVLDLQGFRTSALESLDAALSPLAAGSLAEGERGDALFKRAELKLATSERGRVDSALADLTESVILSPKNAKAWCALGECYEGKKMEVEAKKAYKEALELEPQFSVPVEALNSNGEKDAVSS* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1155 227 Pfam Tetratricopeptide repeat 176 209 IPR001440 GO:0005515
Psa5g1155 227 Gene3D Tetratricopeptide repeat domain 36 134 IPR011990 GO:0005515
Psa5g1155 227 SUPERFAMILY TPR-like 79 210 IPR011990 GO:0005515
Psa5g1155 227 SMART tpr_5 176 209 IPR019734 GO:0005515
Psa5g1155 227 SMART tpr_5 139 175 IPR019734 GO:0005515
Psa5g1155 227 ProSiteProfiles TPR repeat profile. 176 209 IPR019734 GO:0005515
Psa5g1155 227 Gene3D Tetratricopeptide repeat domain 135 219 IPR011990 GO:0005515
Psa5g1155 227 PANTHER - 10 219 - -
Psa5g1155 227 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 10 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1155 Psa-Chr5 90296045 90299968 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1155 - - gmx:100799725 260.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g1155 5 90296045 90299968 Psa5g1155 5 90296045 90299968 ECH