Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1154 ATGGGTATTGTATCTTCAAATGGATATCAGTATGGGGATCCTTCCCAAATTGCCTTTAAATTGTGCGTACAAACTGCTTCTACCAAACCTGTTGAAGAACAAGGTGGAAAGTTGACTTCATGGAAGGACAATAATTTCCCAAAGATTGATCATTTTGAAGACTCGGATTCCATTATATCTGTTGATCTCCATATTCCAACAACTTCCTATTGGTGCATGAAGGCAATTGAAGAAGAAATAACTAATTTTCGGGATTTATTGTCTGAAGATGAGTGTAAAATTGGAAAGCTTTCACTTGCTAGACTTTTGACTGCTCTTGATTTGTTAACGCATCAACATGACAAAAGAAAAAACCATACTGAAAAAGTTCTTAAACTTTACACTGATTTGGTGGAGTTGGATTCAACACATTCACTATACTACAAGGATGAGCATAGTCTGGTATTACTTCAGCAGGGTTGGAAGCTATGCAACTTCTATCTTCCTTAA 489 0.362 MGIVSSNGYQYGDPSQIAFKLCVQTASTKPVEEQGGKLTSWKDNNFPKIDHFEDSDSIISVDLHIPTTSYWCMKAIEEEITNFRDLLSEDECKIGKLSLARLLTALDLLTHQHDKRKNHTEKVLKLYTDLVELDSTHSLYYKDEHSLVLLQQGWKLCNFYLP* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1154 162 Coils Coil 73 93 - -
Psa5g1154 162 PANTHER PROTEIN FARNESYLTRANSFERASE ALPHA SUBUNIT/RAB GERANYLGERANYL TRANSFERASE ALPHA SUBUNIT 67 151 - -
Psa5g1154 162 PANTHER - 67 151 - -
Psa5g1154 162 SUPERFAMILY Protein prenylyltransferase 76 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1154 Psa-Chr5 90295273 90296626 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1154 K14050 - gmx:100807900 207.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g1154 5 90295273 90296626 Psa5g1154 5 90295273 90296626 ECH