Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1152 ATGTCCACCGCTACCGAAGATTTCCAAGGTGTTTCAAATTGTTATGTGTTCAAGAGCCGGTTGCAGGAGTATGCTCAGAAAGCGGGACTCCCCACACCCGTGTATGAAACTATCAAGGACGGGCCTTCCCATGAACCTTGTTTCAGGTCAACGGTGATTGTGAATGATGTTCGGTATGATTCTTTGCCTGGATTTTTTAACCGTAAAGCAGCAGAGCAGTCAGCTGCAGAGGTTGCTTTGATGGAGTTAGCCAAATCTGGTGAAGTTAATCAGTCCATCACTCAACCTGTTCATGAAACTGGATTATGCAAGAATCTACTTCAGGAGTATGCTCAGAAGATGAACTATGCAATGCCAACGTATCAATGCAAAAAAGATGATACACCACCAGGTAGAGTACCGTTATTTTCATGTACGGTCGACATTGGAGGGATTCTCTATATTGGGGGAACAACAAAAACAAAGAAGGAAGCCGAGATAAAAGCTGCAAGAACTGCTTTATTAGCTATCCAGACAAATGCATCTCAGGCTTCTGAAAACCAGTTTGGCCATTTGACTGTCATTCCATCCAGAAAAAGGGCAGCAGATTCTGTCGCTGATGAGGCTTCGAAAGCTCCAAAGCCTAAGAAAGCACGGTTTAAAAGGAAATTTCCCAAGAGGAAACAGTCTAGAGACAAGAAGCCTCATGTTCAGACTGTCAATGCTGGCGATGGAGCAAATGTCAATCACGGGATAGAATCACTTGCAAATGCTGGCGATGGAGCAAATGTCAATCACGGGATAGAATCACTTACAAATGCTGGCGATGGAGCAAATGTCAATCACGGGATAGAATCACTTACAAATGCTAATGATGAATCTGGCATTCAGGAAATCAAATCTGAAGCAATGTTCCCTTCAGAAGCGGTGAAGAATTCTGAGAATGGAGTCCCTTCAGAAGCGGTGAAGAATTCTGAGAATGGAGTCCCTTCAGAAGCCGTGAAGAATTCTGAGAATGGAGTATCGACTAACCATCATGAGAAAGAGACGACTATCCATCATGAGAAAGAGACGACTATCCATCATGAGAAAGCGGCGTTAGCTGGAGATGGGTCTTTTGCTTTGAATAAGCAAGAGGTTTTTGATAATGGGAAGTTGACAGAATTTCAATCCGAAGAGGTCAAGCTTGGGAATGTTGTTACAGAAGTGTCGTTTGCTCCAAACGGAGACTTACCAGCAAACGGAGACATACCGGCAAAGAGCAATGGGATGTTTGCGCCAACCGGAGACACGGCAAAGAGCGATGGGATGTTTGCTCCAACCAGAGACATACCGGCAAAGAGCGATGGGATGTTTGTGCCAAATGGAGACGACATACCGGCAAAGAGTGATGAGATGAACAAACATTTTAATGGAGATATGGTCTCTAGCAACTGA 1416 0.4435 MSTATEDFQGVSNCYVFKSRLQEYAQKAGLPTPVYETIKDGPSHEPCFRSTVIVNDVRYDSLPGFFNRKAAEQSAAEVALMELAKSGEVNQSITQPVHETGLCKNLLQEYAQKMNYAMPTYQCKKDDTPPGRVPLFSCTVDIGGILYIGGTTKTKKEAEIKAARTALLAIQTNASQASENQFGHLTVIPSRKRAADSVADEASKAPKPKKARFKRKFPKRKQSRDKKPHVQTVNAGDGANVNHGIESLANAGDGANVNHGIESLTNAGDGANVNHGIESLTNANDESGIQEIKSEAMFPSEAVKNSENGVPSEAVKNSENGVPSEAVKNSENGVSTNHHEKETTIHHEKETTIHHEKAALAGDGSFALNKQEVFDNGKLTEFQSEEVKLGNVVTEVSFAPNGDLPANGDIPAKSNGMFAPTGDTAKSDGMFAPTRDIPAKSDGMFVPNGDDIPAKSDEMNKHFNGDMVSSN* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1152 471 MobiDBLite consensus disorder prediction 208 226 - -
Psa5g1152 471 PANTHER RIBONUCLEASE III 5 346 IPR011907 GO:0003723|GO:0004525|GO:0006364
Psa5g1152 471 CDD DSRM_AtDRB-like_rpt1 16 84 IPR044450 GO:0003725
Psa5g1152 471 MobiDBLite consensus disorder prediction 330 349 - -
Psa5g1152 471 PANTHER DOUBLE-STRANDED RNA-BINDING PROTEIN 1 5 346 IPR031147 GO:0003725
Psa5g1152 471 SUPERFAMILY dsRNA-binding domain-like 16 83 - -
Psa5g1152 471 Pfam Double-stranded RNA binding motif 104 168 IPR014720 -
Psa5g1152 471 Pfam Double-stranded RNA binding motif 18 82 IPR014720 -
Psa5g1152 471 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 16 85 IPR014720 -
Psa5g1152 471 Gene3D - 17 98 - -
Psa5g1152 471 MobiDBLite consensus disorder prediction 196 239 - -
Psa5g1152 471 Gene3D - 99 172 - -
Psa5g1152 471 SUPERFAMILY dsRNA-binding domain-like 104 171 - -
Psa5g1152 471 MobiDBLite consensus disorder prediction 334 349 - -
Psa5g1152 471 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 102 172 IPR014720 -
Psa5g1152 471 SMART DRBM_3 103 171 IPR014720 -
Psa5g1152 471 SMART DRBM_3 17 84 IPR014720 -
Psa5g1152 471 MobiDBLite consensus disorder prediction 452 471 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1152 - - mtr:MTR_3g100120 442.965
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g1152 5 90268768 90271945 Psa5g1152 5 90268768 90271945 ECH