Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1149 ATGTCTCCGCTGCCAAATTTGGATACTTCCAGAATTTCAACTGTTGTTCCTGCAACTCCTCGAGGCGAAAACCATGGCGAGCACAACTTAAACTACATGGACTTGTTAATGAAACTCCACTATATTCGAACCATTCATTTATTCGATTCTGAAGCAGTTCAAAGTCTCCCATTTTCCGATTTAAAAGCGCCTATGTTTCCTTTGCTCGATTCATGCCGGCATGTTTCGGGTCGGATAAGAATATCGGAATCAGGAAGACCGTTTATCAAGTGCAACGACGCCGGTGTTCGCATCGCGGAGTGGCAGTGTGACAAAACGTTGCGTGAATGGATGGATGAAAAGGAGTACTCAGTTGATGGACTCGTATACGATCATGTGCTTGGTCCTGATCTTGCTTTTTCCCCCTTGGTTTTTGTAAAGTTCACATACTTCAAGTGTGGAGGACTTTCGGTGGGACTGAGTTGGGCTCATATACTTGGAGATGCATTTTCAGCTTTTAGCTTCATCACCAAATGGAGTGACACTCTAGCTGCTCAACCTCCGCCAAAATCTCTTCACATGCCAAATCTCACCAAACATAAATCCTTATCAAATTCTATTACTGATTATCCCATTTCTGTTAAAAAGGCAACACTGGTTGACAAGTATTGGCTTGCTGCTAATGACAGTTATGTAGCTACTCACACTTTTCACATCACTTTCAAACAACTTCATCATTTGGCCACAACATTCAAATCTACCGATACACATACAAAATATTTTGAAATTATTTCAGCTATGATATGGAAATGTATAGCACAAATAAGGGGAGATTATGGACCTAGGGTTGTGACAATATCCACTACAAATGTCTCTAACGGTGTTGAAAATGAATTTTCAAGGAATGACTTTGTGTTGAGTAGAGTTGAAACCAATTTATCACCCGGTGAATCTAATTTATCAGAGTTAGTGAATCTGATAGCTGAGAAAAAAATGAATGAGAATCATGTATTGAAAAAATTGATGGAAGAAAGTGATGTAAAAGGAGATTTTGTTGTCTATGGTGCAAAATTAACATTTGTAGATTTGGAAGAAGGTGATTTTTATGGGGTGAAGATTAATGGAAAGAAACCTGTAATGGTAAACTGTGATATTCGTGGTGTAGGTGATGAAGGGGTTGTCTTGGTTCTTCCAGGACCAGAAGATAATGATGGTAATAATGGAAGAATGGTAACAATTTCATTGCCAGGAAAAGAACTCGACCAGCTGAAAGGTAAACTAGAAAAAGAATGGGGTATACAATATTATTCACGTCTTGGATGTTGA 1305 0.3893 MSPLPNLDTSRISTVVPATPRGENHGEHNLNYMDLLMKLHYIRTIHLFDSEAVQSLPFSDLKAPMFPLLDSCRHVSGRIRISESGRPFIKCNDAGVRIAEWQCDKTLREWMDEKEYSVDGLVYDHVLGPDLAFSPLVFVKFTYFKCGGLSVGLSWAHILGDAFSAFSFITKWSDTLAAQPPPKSLHMPNLTKHKSLSNSITDYPISVKKATLVDKYWLAANDSYVATHTFHITFKQLHHLATTFKSTDTHTKYFEIISAMIWKCIAQIRGDYGPRVVTISTTNVSNGVENEFSRNDFVLSRVETNLSPGESNLSELVNLIAEKKMNENHVLKKLMEESDVKGDFVVYGAKLTFVDLEEGDFYGVKINGKKPVMVNCDIRGVGDEGVVLVLPGPEDNDGNNGRMVTISLPGKELDQLKGKLEKEWGIQYYSRLGC* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1149 434 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 9 424 - -
Psa5g1149 434 Pfam Transferase family 10 421 - -
Psa5g1149 434 Gene3D - 8 203 IPR023213 -
Psa5g1149 434 Gene3D - 220 419 IPR023213 -
Psa5g1149 434 PANTHER PROTEIN ECERIFERUM 2 9 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1149 Psa-Chr5 90001843 90003247 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g1149 11 417 Acyl Lipid Metabolism Gene Families AT4G24510 40.758 1.98e-96 294
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1149 - - mtr:MTR_3g100150 674.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g1149 5 90001843 90003247 Psa5g1149 5 90001843 90003247 ECH