Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1148 ATGGAAAACTCGGAGAAGGTTGATGCTGGAAACCTCTCAGACTCAGAGAAGGCAATAAATGCGGTATGTGTTTCCGCTGACGACGAAAACATCATACTAAATCCTCAGTTTGAGGATGGCCTGAATAACTGGACTGGAAGAGGATGCAAGATTGCGTTACACGATTCCATGGGAGATGGGAAAGTCCTCCCGAAATCCGGGAAATTCTTTGCAGCTGCAACCGAGCGCACGCAAAGCTGGAATGGAATTCAGCAAGAGATCACTGGACGAGTGCAGCGCAAACTTGCGTATGAAGTCACTGCTTTAGTTCGGATATTTGGGAACAATGTCAATACTTCTGATCTTCGTGTTACATTGTATGTTCAAAAACCAGATCTTCGAGAGCAGTATATAGGCATTGCCAATGTGCAGGCGACAAATAAAGATTGGACTCAAATGCAAGGAAAGTTCCTTCTAAATGATTCTCCCTCAAAAGTTATTGTTTATTTTGAAGGTCCTGCTGCAGGCACTGACATTCTTCTAAATAGTTTGGTTATAAAGCATGCTGCGAAAACACCACCTTCGCCACCCCCGGATTTTGAGAATGTTGCTTTCGGGGTTAATATAATTGAGAACAGCAATCTGGATAATGGCACAAACGGGTGGTCTCCGCTTGGTAATTGTACTTTGAGCATTGGAACTGGTTCACCGCGTGTAATTCCACCAATGGCAAGAGACTCTCTCGGCCCTCATGAATCCCTGAGTGGACGCTACATTCTTGTAACCAACCGCACGCAAACATGGATGGGTCCTACTCAGACGATTACTGAGAAATTGAAACTCTATTTAACTTATCAAGTATCTGCTTGGGTCCGGACAAGCTCCGGATCACACGGCCCTCAGAATGTCGGCATTTCGCTTAGCGTTGACGGCCAGTGGGTCAATGGAGGACAAACTGAAGTGGCTGATAGCAGATGGCATGAAATCGGCGGTTCATTTAGAATTGAAAAACAGCCATCTAATGTTTTTGTTTATATTCAAGGTCCTGTCTCTGGAGTCGACTTAATGGTCGCTGGACTTCAAATTTTTCCTGTCGATAGACAGGCAAGGTTTCGATATTTAAGGAAGCAGACAGACAAGATCCGTAAACGTGATGTTACATTAAAATTTTCTGGTGTGGACACATGCGAGTATACTTTTGTGAAAGTTAAACAAATAGAGAATGATTTTCCAATTGGATCATGCATCACCCGAACAAATATCGACAACGAAGATTTTGTAGACTTCTTTGTGCAACATTTTAACTGGGCTGTATTCGGTAACGAGTTGAAATGGTTTTGGACAGAGCCACAAAAAGGAAATTTCAACTACAAAGATGCTGATGATATGTTAGACTTGTGTCAAAAATACAAGATCGACATTCGCGGACATTGCATCTTCTGGGAAGTGGATAGCAATGTTCAACAATGGGTCAAATCACTTAACAGAAACGATTTAATGACAGCGGTTCAGAATCGGTTAACAGGTTTATTGGCTCGCTACAAAGGCAAGTTCAAGCACTATGATGTTAACAATGAAATGTTGCATGGTTCATTTTATCAAGACAGACTAGGTAAGGATATAAGGGCAAACATGTTCAAGACTGCGCATCAAGTCGATCCATCTGTTAACCTATTTGTGAATGACTATCACGTCGAAGATGGATGTGACACGAATTCTTCTCCGGAAAAATACATGCAACAGATTCTTGATTTGCAAGACCAAGGTGCCCCGGTTGGGGGAATCGGAATTCAGGGTCACATTGATAGTCCTGTCGGGCCTATTGTTTGTTCTGCGCTCGACAAACTTGCTACTATCGGTCTGCCAATCTGGTTCACCGAGCTTGACGTGTCTTCGACTAATGAATATGTTCGAGGCGATGATTTGGAAGTTATGTTACGCGAAGCTATGGCGCACCCGTCTGTGGACGGTGTAATGCTATGGGGATTCTGGGAATTGTTTATGAGTCGCGACAATGCGCATTTGGTTAATGCAGAAGGTGAAATGAATGAAGCTGGGAGAAGGTTCATTGATCTTAAACAAGAGTGGTTATCTCATAGTCATGGCCATGTTGATGAACAAGGAGAATTCAGCTTCAGAGGATTCAGTGGTATGTATAATGTGGAAGTTGTTACATTGGAAAAGGTAACTTCCAAGACATTTTTTGTTGATAAGGGTGATTCTTCATTGGTGATATCAATTGACTTGTAA 2229 0.4262 MENSEKVDAGNLSDSEKAINAVCVSADDENIILNPQFEDGLNNWTGRGCKIALHDSMGDGKVLPKSGKFFAAATERTQSWNGIQQEITGRVQRKLAYEVTALVRIFGNNVNTSDLRVTLYVQKPDLREQYIGIANVQATNKDWTQMQGKFLLNDSPSKVIVYFEGPAAGTDILLNSLVIKHAAKTPPSPPPDFENVAFGVNIIENSNLDNGTNGWSPLGNCTLSIGTGSPRVIPPMARDSLGPHESLSGRYILVTNRTQTWMGPTQTITEKLKLYLTYQVSAWVRTSSGSHGPQNVGISLSVDGQWVNGGQTEVADSRWHEIGGSFRIEKQPSNVFVYIQGPVSGVDLMVAGLQIFPVDRQARFRYLRKQTDKIRKRDVTLKFSGVDTCEYTFVKVKQIENDFPIGSCITRTNIDNEDFVDFFVQHFNWAVFGNELKWFWTEPQKGNFNYKDADDMLDLCQKYKIDIRGHCIFWEVDSNVQQWVKSLNRNDLMTAVQNRLTGLLARYKGKFKHYDVNNEMLHGSFYQDRLGKDIRANMFKTAHQVDPSVNLFVNDYHVEDGCDTNSSPEKYMQQILDLQDQGAPVGGIGIQGHIDSPVGPIVCSALDKLATIGLPIWFTELDVSSTNEYVRGDDLEVMLREAMAHPSVDGVMLWGFWELFMSRDNAHLVNAEGEMNEAGRRFIDLKQEWLSHSHGHVDEQGEFSFRGFSGMYNVEVVTLEKVTSKTFFVDKGDSSLVISIDL* 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1148 742 SMART glyco_10 436 686 IPR001000 GO:0004553|GO:0005975
Psa5g1148 742 ProSitePatterns Glycosyl hydrolases family 10 (GH10) active site. 613 623 IPR031158 -
Psa5g1148 742 PRINTS Glycosyl hydrolase family 10 signature 467 479 IPR001000 GO:0004553|GO:0005975
Psa5g1148 742 PRINTS Glycosyl hydrolase family 10 signature 549 560 IPR001000 GO:0004553|GO:0005975
Psa5g1148 742 PRINTS Glycosyl hydrolase family 10 signature 581 593 IPR001000 GO:0004553|GO:0005975
Psa5g1148 742 PANTHER GLYCOSYL HYDROLASE 18 742 IPR044846 GO:0004553|GO:0005975
Psa5g1148 742 SUPERFAMILY (Trans)glycosidases 394 693 IPR017853 -
Psa5g1148 742 SUPERFAMILY Galactose-binding domain-like 28 182 IPR008979 -
Psa5g1148 742 Coils Coil 668 688 - -
Psa5g1148 742 Pfam Carbohydrate binding domain 30 167 IPR003305 GO:0016798
Psa5g1148 742 Pfam Carbohydrate binding domain 201 342 IPR003305 GO:0016798
Psa5g1148 742 SUPERFAMILY Galactose-binding domain-like 199 359 IPR008979 -
Psa5g1148 742 Gene3D Glycosidases 389 698 - -
Psa5g1148 742 ProSiteProfiles Glycosyl hydrolases family 10 (GH10) domain profile. 390 685 IPR001000 GO:0004553|GO:0005975
Psa5g1148 742 PANTHER ENDO-1,4-BETA-XYLANASE A-LIKE PROTEIN 18 742 - -
Psa5g1148 742 Pfam Glycosyl hydrolase family 10 398 656 IPR001000 GO:0004553|GO:0005975
Psa5g1148 742 Gene3D - 23 182 - -
Psa5g1148 742 Gene3D - 197 356 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g1148 24 742 Glycoside Hydrolase AT1G58370 70.401 0.0 1104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1148 - - gmx:100784250 1293.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g1148 5 89442202 89445746 Psa5g1148 5 89442202 89445746 ECH